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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-AA_A.duranensis_x_A.duranensis_a
(Reference Set)
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Correspondences
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Maps A03
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.duranensis_a [ View Map Set Info ]
Map Name: A03
Map Start: 0 cM
Map Stop: 145.626 cM
Features by Type:
166 SNP
100 SSR
266 Total

Map Features

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Items 1 to 25 of 266.       of 11 | Next
peanut - AA_A.duranensis_x_A.duranensis_a - A03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM32 SSR 0 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 TC3E02_c1 SSR 18.488 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 TC3E02_c3 SSR 6.947 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG04 Ah1TC3E02 SSR 56.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A03 TC3E02 SSR 269.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 TC3E02_c2 SSR 17.633 (cM) Automated name-based, Automated name-based View Maps
SNP712 SNP 8.137 No other positions
GM2599 SSR 8.89 No other positions
GM2598 SSR 9.108 No other positions
SNP927 SNP 9.108 peanut - AA_A.duranensis_x_A.stenosperma_d - A03 DS_c7338_180 SNP 0.8 (cM) Automated name-based, Automated name-based View Maps
SNP125 SNP 9.267 soybean - GmJGI8x - Gm11 TOG900871 TOG 15,752,597 - 15,755,543 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TOG900871 SNP 0 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 TOG900871 TOG 7,137,551 - 7,141,025 (cM) Automated name-based, Automated name-based View Maps
chickpea - CaCookUCDavis2009 - CaChr4 Ca_TOG900871 SNP 32.3 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 TOG900871 TOG 13,446,527 - 13,450,452 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr3 TOG900871 TOG 74,423,404 - 74,426,487 (cM) Automated name-based, Automated name-based View Maps
GM2818 SSR 9.394 No other positions
SNP931 SNP 9.683 No other positions
GM2261 SSR 12.121 No other positions
GM2372 SSR 13.436 No other positions
GM1760 SSR 13.955 peanut - TT_TG26_x_GPBD4_a - AhVIII GM1760 SSR 77.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII GM1760 SSR 38.669 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG4 GM1760 SSR 41.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII GM1760 SSR 50.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 GM1760 SSR 47.775 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 GM1760.B08 SSR 23.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 GM1760.A08 SSR 67.42 (cM) Automated name-based, Automated name-based View Maps
GM1149 SSR 15.708 No other positions
GM1609 SSR 17.346 peanut - TT_TG26_x_GPBD4_a - AhXIII GM1609 SSR 169.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 GM1609 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIII GM1609 SSR 236.19 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXIII GM1609 SSR 248.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 GM1609 SSR 267.42 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIII GM1609 SSR 85.648 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG13 GM1609 SSR 8.4 (cM) Automated name-based, Automated name-based View Maps
SNP682 SNP 17.346 No other positions
GM1191 SSR 20.247 No other positions
GM1425 SSR 20.372 No other positions
GM2764 SSR 21.198 No other positions
SNP478 SNP 21.215 No other positions
SNP164 SNP 25.305 peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TOG905182 SNP 14.4 (cM) Automated name-based, Automated name-based View Maps
common bean - PvCookUCDavis2009 - PvLG09 Pv_TOG905182 SNP 17.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_e - LG06 Ah2n_TOG905182_2 SNP 0 (cM) Automated name-based, Automated name-based View Maps
chickpea - CaCookUCDavis2009 - CaChr2 Ca_TOG905182 SNP 118.4 (cM) Automated name-based, Automated name-based View Maps
pigeonpea - CcCookUCDavis2009 - CcLG09 Cc_TOG905182_155 SNP 14 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 TOG905182 TOG 26,846,433 - 26,848,558 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm15 TOG905182 TOG 3,389,159 - 3,391,371 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TOG905182_531 SNP 15.8 (cM) Automated name-based, Automated name-based View Maps
SNP832 SNP 28.349 peanut - AA_A.duranensis_x_A.stenosperma_d - A03 DS_c5636_217 SNP 20 (cM) Automated name-based, Automated name-based View Maps
GM2087 SSR 30.06 No other positions
SNP113 SNP 31.413 soybean - GmJGI8x - Gm12 TOG899728 TOG 4,332,717 - 4,334,539 (cM) Automated name-based, Automated name-based View Maps
common bean - PvCookUCDavis2009 - PvLG05 Pv_TOG899728 SNP 33.3 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm11 TOG899728 TOG 10,323,367 - 10,324,469 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_e - LG06 Ah2n_TOG899728_1 SNP 11.39 (cM) Automated name-based, Automated name-based View Maps
chickpea - CaCookUCDavis2009 - CaChr4 Ca_TOG899728 SNP 25.1 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr3 TOG899728 TOG 78,340,693 - 78,342,677 (cM) Automated name-based, Automated name-based View Maps
SNP335 SNP 31.413 No other positions
SNP342 SNP 31.413 No other positions
SNP780 SNP 31.544 No other positions