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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-AA_A.duranensis_x_A.duranensis_a
(Reference Set)
Min.
Correspondences
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Maps A05
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.duranensis_a [ View Map Set Info ]
Map Name: A05
Map Start: 0 cM
Map Stop: 131.691 cM
Features by Type:
110 SNP
68 SSR
178 Total

Map Features

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Items 1 to 25 of 178.       of 8 | Next
peanut - AA_A.duranensis_x_A.duranensis_a - A05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SNP626 SNP 0 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c3236_729 SNP 131.1 (cM) Automated name-based, Automated name-based View Maps
SNP26 SNP 0.583 peanut - AA_A.duranensis_x_A.stenosperma_e - LG11 Ah2n_TOG895467_1 SNP 1.28 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr3 TOG895467 TOG 44,369,820 - 44,376,147 (cM) Automated name-based, Automated name-based View Maps
chickpea - CaCookUCDavis2009 - CaChr3 Ca_TOG895467 SNP 41.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 TOG895467 SNP 131.7 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 TOG895467 TOG 50,383,404 - 50,391,014 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 TOG895467 TOG 3,342,446 - 3,347,932 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 TOG895467_59 SNP 131.7 (cM) Automated name-based, Automated name-based View Maps
SNP431 SNP 0.583 No other positions
SNP732 SNP 0.583 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c4424_269 SNP 131.1 (cM) Automated name-based, Automated name-based View Maps
SNP60 SNP 1.637 cowpea - VuCookUCDavis2009 - VuLG05 4_119_TOG896767_2_229 SNP 18.04 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 TOG896767 TOG 6,391,194 - 6,396,190 (cM) Automated name-based, Automated name-based View Maps
common bean - PvCookUCDavis2009 - PvLG06 Pv_TOG896767 SNP 14.1 (cM) Automated name-based, Automated name-based View Maps
cowpea - VuCookUCDavis2009 - VuLG05 4_003_TOG896767_2_1211 SNP 13 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 TOG896767 TOG 31,211,933 - 31,221,156 (cM) Automated name-based, Automated name-based View Maps
SNP768 SNP 2.904 No other positions
GM2770 SSR 3.967 No other positions
SNP333 SNP 5.572 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c12649_619 SNP 127.3 (cM) Automated name-based, Automated name-based View Maps
GM2703 SSR 5.963 No other positions
SNP493 SNP 6.193 No other positions
SNP753 SNP 6.193 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c4656_360 SNP 127.3 (cM) Automated name-based, Automated name-based View Maps
RGC44 SSR 6.7 No other positions
SNP974 SNP 7.251 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c8078_215 SNP 127.3 (cM) Automated name-based, Automated name-based View Maps
GM1898 SSR 9.514 No other positions
SNP11 SNP 9.514 soybean - GmJGI8x - Gm02 TOG894393 TOG 7,076,625 - 7,079,573 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 TOG894393 TOG 32,282,632 - 32,285,556 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 TOG894393 TOG 26,646,420 - 26,648,405 (cM) Automated name-based, Automated name-based View Maps
SNP989 SNP 10.071 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 DS_c8405_333 SNP 124.2 (cM) Automated name-based, Automated name-based View Maps
SNP265 SNP 11.805 No other positions
SNP936 SNP 11.805 No other positions
GM1728 SSR 12.387 No other positions
GM1253 SSR 12.728 No other positions
GM1519 SSR 13.747 No other positions
SNP842 SNP 15.584 No other positions
GM948 SSR 16.758 No other positions
SNP291 SNP 17.81 No other positions
GM1261 SSR 17.955 No other positions