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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.duranensis_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A10
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.duranensis_a [ View Map Set Info ]
Map Name: A10
Map Start: 0 cM
Map Stop: 111.412 cM
Features by Type:
90 SNP
63 SSR
153 Total

Map Features

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Items 1 to 25 of 153.       of 7 | Next
peanut - AA_A.duranensis_x_A.duranensis_a - A10
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2001 SSR 0 No other positions
GM950 SSR 5.502 No other positions
GM1373 SSR 6.332 No other positions
GM2266 SSR 8.408 No other positions
GM2082 SSR 8.889 No other positions
SNP107 SNP 8.889 barrel medic - Mt3.0 - MtChr6 TOG899617 TOG 20,235,945 - 20,243,838 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 TOG899617 TOG 37,702,547 - 37,716,076 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 TOG899617 TOG 14,072,456 - 14,091,481 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A10 TOG899617_1026 SNP 78.3 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr3 TOG899617 TOG 8,474,846 - 8,492,783 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_e - LG15 Ah2n_TOG899617_1 SNP 32.94 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A10 TOG899617 SNP 78.9 (cM) Automated name-based, Automated name-based View Maps
cowpea - VuCookUCDavis2009 - VuLG04 4_236_TOG899617_1_1109 SNP 49.89 (cM) Automated name-based, Automated name-based View Maps
common bean - PvCookUCDavis2009 - PvLG05 Pv_TOG899617 SNP 43.7 (cM) Automated name-based, Automated name-based View Maps
GM951 SSR 8.953 No other positions
GM1562 SSR 9.158 No other positions
GM2577 SSR 10.056 No other positions
SNP372 SNP 12.24 No other positions
SNP304 SNP 12.732 No other positions
SNP530 SNP 12.732 No other positions
SNP614 SNP 12.732 No other positions
SNP805 SNP 12.732 peanut - AA_A.duranensis_x_A.stenosperma_d - A10 DS_c5307_258 SNP 75.9 (cM) Automated name-based, Automated name-based View Maps
GM810 SSR 12.899 No other positions
SNP321 SNP 16.257 peanut - AA_A.duranensis_x_A.stenosperma_d - A10 DS_c12368_110 SNP 73.7 (cM) Automated name-based, Automated name-based View Maps
GM1107 SSR 17.977 No other positions
SNP157 SNP 17.977 lotus - LjKazusa200905 - LjChr3 TOG904027 TOG 16,392,776 - 16,451,538 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm04 TOG904027 TOG 17,343,277 - 17,356,282 (cM) Automated name-based, Automated name-based View Maps
chickpea - CaCookUCDavis2009 - CaChr3 Ca_TOG904027 SNP 39.3 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 TOG904027 TOG 1,344,963 - 1,350,400 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_e - LG15 Ah2n_TOG904027_1 SNP 18.35 (cM) Automated name-based, Automated name-based View Maps
cowpea - VuCookUCDavis2009 - VuLG08 3_200_TOG904027_1_396 SNP 66.35 (cM) Automated name-based, Automated name-based View Maps
common bean - PvCookUCDavis2009 - PvLG09 Pv_TOG904027 SNP 52.9 (cM) Automated name-based, Automated name-based View Maps
SNP527 SNP 18.727 No other positions
SNP828 SNP 18.727 peanut - AA_A.duranensis_x_A.stenosperma_d - A10 DS_c5609_294 SNP 70.5 (cM) Automated name-based, Automated name-based View Maps
SNP838 SNP 18.727 peanut - AA_A.duranensis_x_A.stenosperma_d - A10 DS_c5696_55 SNP 69.8 (cM) Automated name-based, Automated name-based View Maps
SNP994 SNP 19.493 No other positions
RGC33 SSR 20.705 No other positions
GM2316 SSR 21.212 No other positions
SNP1004 SNP 21.943 No other positions