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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps A03
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
CAPS
Marker
SCAR
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_a [ View Map Set Info ]
Map Name: A03
Map Start: 0 cM
Map Stop: 269.2 cM
Features by Type:
2 AFLP
8 CAPS
1 SCAR
28 SSR
9 Marker
48 Total

Map Features

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Items 1 to 25 of 48.       of 2 | Next
peanut - AA_A.duranensis_x_A.stenosperma_a - A03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Leg188 CAPS 0 No other positions
S1_A_37A Marker 14 No other positions
P21M68-3 AFLP 16.1 No other positions
S1_A_36C Marker 20.8 No other positions
TC7E04 SSR 25.6 peanut - TT_TAG24_x_GPBD4_a - AhIII TC7E04 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TC7E04 SSR 114 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC7E04 SSR 57.406 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG09 TC7E04 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIII TC7E04 SSR 190.72 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 TC7E04 SSR 140.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIII TC7E04 SSR 12.517 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG03 TC7E04 SSR 88.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXXI TC7E04 SSR 26.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 TC7E04.A03 SSR 31.75 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC7E04.B03 SSR 74.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A08 TC7E04 SSR 0 (cM) Automated name-based, Automated name-based View Maps
RN3E10 SSR 29.1 peanut - TT_ICGS44_x_ICGS76_a - LG14 RN3E10 SSR 6.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 RN3E10 SSR 69.05 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 RN3E10 SSR 112.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXX RN3E10 SSR 6.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 RN3E10 SSR 136.9 (cM) Automated name-based, Automated name-based View Maps
Leg066 Marker 29.6 No other positions
LegTC987 CAPS 32.2 No other positions
P21M68-6 AFLP 40.7 No other positions
TC4G02 SSR 41 peanut - TT_ICGS44_x_ICGS76_a - LG03 TC4G02 SSR 70 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TC4G02 SSR 101.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIII TC4G02 SSR 172.12 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG03 TC4G02 SSR 14 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhIII TC4G02 SSR 166.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC4G02.B03 SSR 240.41 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXV TC4G02 SSR 27.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXV TC4G02 SSR 29.482 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXV TC4G02 SSR 39.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 TC4G02.A03 SSR 249.39 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC4G02 SSR 89.957 (cM) Automated name-based, Automated name-based View Maps
RM1A05 SSR 45.5 No other positions
Leg237 CAPS 47.3 No other positions
gi-560 SSR 51.2 No other positions
LegRAB Marker 61.2 No other positions
Seq19G07 SSR 64.5 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIII pPGSSeq19G07 SSR 62.58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhIII pPGSSeq19G07 SSR 62.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG03 pPGSSeq19G07 SSR 15.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 Seq19G07 SSR 72.591 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG20 pPGSSeq19G07 SSR 161.6 (cM) Automated name-based, Automated name-based View Maps
Ah30 SSR 69.8 peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 Ah30 SSR 209.64 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 Ah30 SSR 64.53 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 Ah30 SSR 82.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 Ah30 SSR 31.977 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB03 Ah30 SSR 24.438 (cM) Automated name-based, Automated name-based View Maps
Ag99 SSR 80 No other positions
PM3 SSR 81.6 peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 PM3.B03 SSR 156.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - B03 PM3 SSR 30.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIII PM3 SSR 25.815 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIII PM3 SSR 97.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIII PM3 SSR 47.18 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB03 PM3 SSR 20.333 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 PM3.A03 SSR 190.43 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 PM3 SSR 70.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG03 PM3 SSR 0 (cM) Automated name-based, Automated name-based View Maps
TC0A01_2 SSR 81.9 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 TC0A01 SSR 100.948 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG7.A Ah1TC0A01 SSR 56.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIII.B TC0A01 SSR 15.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 TC0A01 SSR 186.22 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG02 Ah1TC0A01 SSR 68.5 (cM) Automated name-based, Automated name-based View Maps
TC4E10 SSR 82.2 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 TC4E10 SSR 73.805 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A01 TC4E10.A01 SSR 171.01 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC4E10.B03 SSR 58.85 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXV TC4E10 SSR 67.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TC4E10 SSR 53.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXV TC4E10 SSR 67.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 TC4E10 SSR 26.144 (cM) Automated name-based, Automated name-based View Maps
PM42_1 SSR 83.1 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 PM42 SSR 45.504 (cM) Automated name-based, Automated name-based View Maps
Seq18A05 SSR 93.8 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 Seq18A05 SSR 86.632 (cM) Automated name-based, Automated name-based View Maps
Leg4Gm CAPS 105.7 No other positions
Leg181 CAPS 113.7 No other positions
Leg223 Marker 117.2 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 Leg223 Marker 85.825 (cM) Automated name-based, Automated name-based View Maps