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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps A06
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
CAPS
Marker
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_a [ View Map Set Info ]
Map Name: A06
Map Start: 0 cM
Map Stop: 194.4 cM
Features by Type:
1 AFLP
7 CAPS
1 SNP
15 SSR
9 Marker
33 Total

Map Features

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Items 1 to 25 of 33.       of 2 | Next
peanut - AA_A.duranensis_x_A.stenosperma_a - A06
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AS1RN0x727 SNP 0 No other positions
Ad15B Marker 17.8 No other positions
Ad17E Marker 19.4 No other positions
Leg031 Marker 19.9 No other positions
Ad13D Marker 33.1 No other positions
IPAHM171a SSR 48.4 No other positions
RN0x06 SSR 67.4 peanut - AA_A.duranensis_x_A.stenosperma_d - A06 RN0x06 SSR 108.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 RN0x06 SSR 70.146 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 RN0x06 SSR 41.496 (cM) Automated name-based, Automated name-based View Maps
TC1A08 SSR 68.6 peanut - TT_Tifrunner_x_GT-C20_b - LG6 Ah1TC1A08 SSR 77.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B01 TC1A08 SSR 132.43 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A02 TC1A08 SSR 50.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 TC1A08 SSR 30.735 (cM) Automated name-based, Automated name-based View Maps
TC11A04 SSR 86.1 peanut - TT_TG26_x_GPBD4_b - LG01 Ah2TC11A04 SSR 17.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC11A04 SSR 62.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC11A04 SSR 86.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC11A04.B06 SSR 45.91 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC11A04 SSR 31.85 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 TC11A04 SSR 26.458 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX TC11A04 SSR 57.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah2TC11A04 SSR 24.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC11A04 SSR 64.144 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC11A04 SSR 36.977 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC11A04 SSR 74.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG06 TC11A04 SSR 0.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC11A04 SSR 62.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC11A04.A06 SSR 148.59 (cM) Automated name-based, Automated name-based View Maps
Leg092 CAPS 86.7 No other positions
TC1A02 SSR 86.7 peanut - TT_ICGS76_x_CSMG84-1_a - LG06 TC1A02 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 TC1A02 SSR 19.836 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC1A02 SSR 39.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC1A02 SSR 31.544 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B06 TC1A02 SSR 55.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC1A02 SSR 39.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC1A02.B06 SSR 42.22 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC1A02 SSR 54.507 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC1A02.A06 SSR 131.33 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC1A02 SSR 74.3 (cM) Automated name-based, Automated name-based View Maps
RN0x614 SSR 87.8 No other positions
Seq15D06_2 SSR 87.8 No other positions
PM24 SSR 89.1 peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 PM24 SSR 39.19 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 PM24 SSR 88.9 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 PM24 SSR 15.613 (cM) Automated name-based, Automated name-based View Maps
TC7C06 SSR 94.5 peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC7C06 SSR 93.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 TC7C06 SSR 26.031 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC7C06 SSR 167.29 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVI TC7C06 SSR 33.666 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC7C06 SSR 57.666 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah2TC7C06 SSR 35.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVI TC7C06 SSR 84.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC7C06 SSR 75.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVI TC7C06 SSR 26.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC7C06 SSR 81.15 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG06 TC7C06 SSR 3.1 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC7C06 SSR 22.745 (cM) Automated name-based, Automated name-based View Maps
gi-906 SSR 97.8 No other positions
Leg045 CAPS 103.1 No other positions
H1 Marker 110.7 No other positions
Leg346 CAPS 113.2 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 Leg346 CAPS 43.822 (cM) Automated name-based, Automated name-based View Maps
RN21H01 SSR 119.4 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 RN21H01 SSR 45.123 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 RN21H01 SSR 49.94 (cM) Automated name-based, Automated name-based View Maps
Seq4H06 SSR 124.4 peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 Seq4H06 SSR 12.658 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 Seq4H06 SSR 42.672 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 seq4H06 SSR 49.34 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 Seq4H06 SSR 11.436 (cM) Automated name-based, Automated name-based View Maps
P18M60-3 AFLP 130.4 No other positions
Leg186 Marker 133.5 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 Leg186 Marker 40.136 (cM) Automated name-based, Automated name-based View Maps
Leg11MGm Marker 137.9 No other positions
TC3H07 SSR 139.5 peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC3H07 SSR 9.157 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah1TC3H07 SSR 72.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC3H07 SSR 16.455 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVII TC3H07 SSR 145.31 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC3H07.B06 SSR 24.56 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC3H07 SSR 50.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXIX TC3H07 SSR 14.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG17 TC3H07 SSR 83.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC3H07 SSR 89.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX TC3H07 SSR 81.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A06 TC3H07 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 TC3H07.A04 SSR 25.8 (cM) Automated name-based, Automated name-based View Maps