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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A08
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
CAPS
Marker
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_a [ View Map Set Info ]
Map Name: A08
Map Start: 0 cM
Map Stop: 272.7 cM
Features by Type:
11 AFLP
3 CAPS
2 SNP
17 SSR
11 Marker
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
peanut - AA_A.duranensis_x_A.stenosperma_a - A08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
gi-716 SSR 0 peanut - BB_A.ipaensis_x_A.magna_b - B08 gi-716 SSR 40.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 gi-716 SSR 49.53 (cM) Automated name-based, Automated name-based View Maps
Leg033 CAPS 4.1 No other positions
TC9F04 SSR 5.7 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 TC9F04 SSR 92.592 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC9F04 SSR 126.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhII TC9F04 SSR 48.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC9F04.A08 SSR 115.02 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG10 TC9F04 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG08 TC9F04 SSR 117.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 TC9F04.B02 SSR 130.21 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhII TC9F04 SSR 42.742 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC9F04 SSR 38.43 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 TC9F04 SSR 3.818 (cM) Automated name-based, Automated name-based View Maps
Ah-558 SSR 6.3 peanut - BB_A.ipaensis_x_A.magna_b - B08 Ah-558 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 Ah-558 SSR 126.3 (cM) Automated name-based, Automated name-based View Maps
TC4H02_2 SSR 6.3 peanut - AA_A.duranensis_x_A.stenosperma_a - A02 TC4H02_1 SSR 215.4 (cM) Automated name-based View Maps
RM15C11 SSR 8.2 No other positions
TC1E05 SSR 11.8 peanut - TT_Tifrunner_x_GT-C20_b - LG12 Ah1TC1E05 SSR 94.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 TC1E05 SSR 60.274 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC1E05 SSR 56.23 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A08 GM10 SSR 36.044 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC1E05 SSR 122.1 (cM) Automated name-based, Automated name-based View Maps
P25M46-7 AFLP 18.5 No other positions
Ad21E Marker 23.8 No other positions
Ad25A Marker 28.2 No other positions
P21M36-7 AFLP 29.3 No other positions
P16M48-3 AFLP 29.4 No other positions
Leg002 Marker 42.3 No other positions
P16M48-7 AFLP 46 No other positions
gi-7295_2 SSR 51.8 peanut - AA_A.duranensis_x_A.stenosperma_a - A09 gi-7295_1 SSR 160.9 (cM) Automated name-based View Maps
RN1A09 SSR 58.9 No other positions
PM188 SSR 60.5 peanut - TT_Tifrunner_x_GT-C20_b - LG4 PM188 SSR 68.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 PM188 SSR 73.115 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 PM188 SSR 117.16 (cM) Automated name-based, Automated name-based View Maps
TC6H03 SSR 61 peanut - TT_TG26_x_GPBD4_a - AhVIII TC6H03 SSR 72.4 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC6H03 SSR 107.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII TC6H03 SSR 31.853 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 TC6H03 SSR 64.468 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII TC6H03 SSR 41.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC6H03.A08 SSR 79.58 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB08 TC6H03 SSR 17.862 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG01 Ah1TC6H03 SSR 10 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII TC6H03 SSR 77.4 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 TC6H03 SSR 58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII TC6H03 SSR 77.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 TC6H03.B08 SSR 47.96 (cM) Automated name-based, Automated name-based View Maps
TC9F10 SSR 61.6 peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC9F10 SSR 107.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 TC9F10 SSR 59.169 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 TC9F10.B08 SSR 53.81 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII TC9F10 SSR 41.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 TC9F10 SSR 64.468 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII TC9F10 SSR 76.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVIII TC9F10 SSR 69.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII TC9F10 SSR 76.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII TC9F10 SSR 30.864 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC9F10.A08 SSR 81.93 (cM) Automated name-based, Automated name-based View Maps
RN2H11 SSR 67.6 No other positions
P21M68-4 AFLP 74.8 No other positions
Leg17MGm Marker 91.1 No other positions
P18M45-26 AFLP 102.3 No other positions
RM5G08 SSR 110.7 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 RM5G08 SSR 84.067 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 RM5G08 SSR 66.72 (cM) Automated name-based, Automated name-based View Maps
Ad14C AFLP 123.4 No other positions