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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_a [ View Map Set Info ]
Map Name: A10
Map Start: 0 cM
Map Stop: 67.5 cM
Features by Type:
6 SSR
1 Marker
7 Total

Map Features

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Items 1 to 7 of 7.
peanut - AA_A.duranensis_x_A.stenosperma_a - A10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC2C12 SSR 0 No other positions
RN0x681 SSR 23.7 peanut - AA_A.duranensis_x_A.stenosperma_d - A06 RN0x681 SSR 130.7 (cM) Automated name-based, Automated name-based View Maps
gi-936 SSR 27.3 peanut - AA_A.duranensis_x_A.duranensis_a - A06 GM226 SSR 24.543 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B06 gi-936 SSR 79.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 gi-936 SSR 129.4 (cM) Automated name-based, Automated name-based View Maps
gi-623 SSR 28.2 No other positions
RM15H08 SSR 40.1 No other positions
TC4D09 SSR 58.4 peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC4D09 SSR 3.95 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhX TC4D09 SSR 49.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC4D09 SSR 54.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC4D09 SSR 44.137 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC4D09 SSR 109.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 TC4D09 SSR 61.98 (cM) Automated name-based, Automated name-based View Maps
As13C Marker 67.5 No other positions