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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A04
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
AFLP
CAPS
Marker
SCAR
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_a [ View Map Set Info ]
Map Name: A04
Map Start: 0 cM
Map Stop: 308.6 cM
Features by Type:
6 AFLP
6 CAPS
1 SCAR
2 SNP
18 SSR
11 Marker
44 Total

Map Features

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Items 1 to 25 of 44.       of 2 | Next
peanut - AA_A.duranensis_x_A.stenosperma_a - A04
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Leg152 CAPS 0 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 Leg152 CAPS 39.64 (cM) Automated name-based, Automated name-based View Maps
As24K Marker 23.5 No other positions
As20A Marker 32.9 No other positions
AHBGSI1001D05-1 SNP 37.7 No other positions
AHBGSI1001D05-2 Marker 37.7 No other positions
AHBGSI1002B03 SNP 50.4 No other positions
S1_A_36_B Marker 61.1 No other positions
S1_A_36_D Marker 62.6 No other positions
Ad26B Marker 72.4 No other positions
As14D Marker 79.6 No other positions
Leg044 Marker 89.6 No other positions
As27E Marker 93.1 No other positions
P18M44-5 AFLP 95.6 No other positions
P25M46-2 AFLP 95.6 No other positions
M14 AFLP 102 No other positions
P26M68-3 AFLP 116 No other positions
As26A Marker 136 No other positions
TC7G10 SSR 149.4 peanut - AA_A.duranensis_x_A.stenosperma_b - AA04 TC7G10 SSR 18.331 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA04 TC7G10 SSR 26.331 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A04 TC7G10 SSR 11.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 TC7G10 SSR 12.58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG9 Ah2TC7G10 SSR 69 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B04 TC7G10 SSR 17.4 (cM) Automated name-based, Automated name-based View Maps
Leg930 CAPS 154.5 No other positions
Leg14MGm CAPS 158.4 No other positions
Ah-229 SSR 163.3 peanut - AA_A.duranensis_x_A.stenosperma_d - A04 Ah-229 SSR 19.9 (cM) Automated name-based, Automated name-based View Maps
Leg156 Marker 167.4 No other positions
Leg136 CAPS 172.6 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 Leg136 CAPS 53.113 (cM) Automated name-based, Automated name-based View Maps
RN10F04 SSR 174.6 No other positions
TC5A07 SSR 175.2 peanut - TT_TG26_x_GPBD4_b - LG07 Ah1TC5A07 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA04 TC5A07 SSR 59.186 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVII TC5A07 SSR 8.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA04 TC5A07 SSR 36.889 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 TC5A07 SSR 51.937 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVII TC5A07 SSR 6.593 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A04 TC5A07 SSR 29.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG9 Ah1TC5A07 SSR 62.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 TC5A07 SSR 146.23 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVII TC5A07 SSR 9.6 (cM) Automated name-based, Automated name-based View Maps