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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_b
(Reference Set)
Min.
Correspondences
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Maps AA03
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_b [ View Map Set Info ]
Map Name: AA03
Map Start: 0 cM
Map Stop: 33.275 cM
Features by Type:
61 SSR
2 transposon
63 Total

Map Features

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Items 1 to 25 of 63.       of 3 | Next
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS2185 SSR 0 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS2185 SSR 82.852 (cM) Automated name-based, Automated name-based View Maps
AHS2228_a1 SSR 0.487 No other positions
AHGS2482 SSR 2.089 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS2482 SSR 64.583 (cM) Automated name-based, Automated name-based View Maps
AHGS1312 SSR 3.292 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS1312 SSR 85.348 (cM) Automated name-based, Automated name-based View Maps
TC9F04 SSR 3.818 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 TC9F04 SSR 92.592 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG10 TC9F04 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC9F04 SSR 126.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 TC9F04.B02 SSR 130.21 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC9F04 SSR 38.43 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhII TC9F04 SSR 48.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC9F04.A08 SSR 115.02 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG08 TC9F04 SSR 117.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhII TC9F04 SSR 42.742 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A08 TC9F04 SSR 5.7 (cM) Automated name-based, Automated name-based View Maps
Ah558 SSR 3.843 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 Ah558 SSR 66.951 (cM) Automated name-based, Automated name-based View Maps
AHS1733 SSR 3.869 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHS1733 SSR 66.79 (cM) Automated name-based, Automated name-based View Maps
AHGS1727 SSR 3.899 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1727 SSR 29.1 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1727 SSR 0 (cM) Automated name-based, Automated name-based View Maps
AHGS2297_a1 SSR 3.899 No other positions
Leg33_a1 SSR 4.255 No other positions
AHGS3171 SSR 4.573 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS3171 SSR 41.5 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB08 AHGS3171 SSR 28.261 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS3171 SSR 85.793 (cM) Automated name-based, Automated name-based View Maps
AHS2228_a2 SSR 4.573 No other positions
AHGS1460 SSR 5.447 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS1460 SSR 68.732 (cM) Automated name-based, Automated name-based View Maps
AHS3040 SSR 6.584 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHS3040 SSR 88.849 (cM) Automated name-based, Automated name-based View Maps
AHGS2353_a1 SSR 12.751 No other positions
AHGS2140 SSR 13.591 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS2140 SSR 78.641 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS2140 SSR 43.965 (cM) Automated name-based, Automated name-based View Maps
AHGS2177 SSR 14.741 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS2177 SSR 77.902 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS2177 SSR 41.88 (cM) Automated name-based, Automated name-based View Maps
AHGS1610 SSR 20.359 No other positions
AHGS1338 SSR 20.543 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS1338 SSR 34.091 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS1338 SSR 74.935 (cM) Automated name-based, Automated name-based View Maps
AHGS2418 SSR 20.543 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS2418 SSR 75.318 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS2418 SSR 33.932 (cM) Automated name-based, Automated name-based View Maps
Leg24 SSR 21.872 No other positions
AHGS2527 SSR 22.26 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS2527 SSR 55.667 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS2527 SSR 19.054 (cM) Automated name-based, Automated name-based View Maps
AHS2318 SSR 22.726 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHS2318 SSR 84.343 (cM) Automated name-based, Automated name-based View Maps
AHGS2353_a2 SSR 22.933 No other positions
AHGS3728 SSR 23.244 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A03 AHGS3728 SSR 84.933 (cM) Automated name-based, Automated name-based View Maps