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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AA_A.duranensis_x_A.stenosperma_b
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps AA09
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AA_A.duranensis_x_A.stenosperma_b [ View Map Set Info ]
Map Name: AA09
Map Start: 0 cM
Map Stop: 24.463 cM
Features by Type:
45 SSR
3 transposon
48 Total

Map Features

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Items 1 to 25 of 48.       of 2 | Next
peanut - AA_A.duranensis_x_A.stenosperma_b - AA09
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Leg199 SSR 0 peanut - AA_A.duranensis_x_A.stenosperma_d - A09 Leg199 SSR 39.1 (cM) Automated name-based, Automated name-based View Maps
Leg1 SSR 1.75 No other positions
AHS1950 SSR 2.765 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AHS1950 SSR 60.701 (cM) Automated name-based, Automated name-based View Maps
AHGS2554 SSR 3.308 peanut - BB_A.ipaensis_x_A.magna_a - BB09 AHGS2554 SSR 41.323 (cM) Automated name-based, Automated name-based View Maps
AHS1779 SSR 3.657 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHS1779 SSR 70.255 (cM) Automated name-based, Automated name-based View Maps
AHS1915 SSR 3.689 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHS1915 SSR 70.307 (cM) Automated name-based, Automated name-based View Maps
Leg732 SSR 4.369 peanut - AA_A.duranensis_x_A.stenosperma_d - A09 Leg732 SSR 36.9 (cM) Automated name-based, Automated name-based View Maps
AhTE0572 transposon 6.022 No other positions
AHGS2635 SSR 7.948 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHGS2635 SSR 72.658 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2635 SSR 33.965 (cM) Automated name-based, Automated name-based View Maps
AhTE0328 transposon 8.124 No other positions
AHS1404 SSR 8.239 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHS1404 SSR 74.33 (cM) Automated name-based, Automated name-based View Maps
AHGS1821 SSR 8.577 peanut - BB_A.ipaensis_x_A.magna_b - B01 AHGS1821 SSR 25.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB01 AHGS1821 SSR 11.561 (cM) Automated name-based, Automated name-based View Maps
AHGS2321 SSR 10.017 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS2321 SSR 49.9 (cM) Automated name-based, Automated name-based View Maps
AHS0354 SSR 11.125 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHS0354 SSR 82.992 (cM) Automated name-based, Automated name-based View Maps
AHGS3179 SSR 12.017 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS3179 SSR 35.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS3179 SSR 34.376 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB09 AHGS3179 SSR 18.141 (cM) Automated name-based, Automated name-based View Maps
AHGS1941_a2 SSR 12.303 No other positions
AHS1620 SSR 12.472 peanut - BB_A.ipaensis_x_A.magna_a - BB09 AHS1620 SSR 16.54 (cM) Automated name-based, Automated name-based View Maps
AHS2508 SSR 13.044 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A09 AHS2508 SSR 79.202 (cM) Automated name-based, Automated name-based View Maps
Leg100 SSR 13.152 peanut - AA_A.duranensis_x_A.stenosperma_d - A09 Leg100 SSR 24.5 (cM) Automated name-based, Automated name-based View Maps
AHS2398 SSR 13.558 peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHS2398 SSR 40.034 (cM) Automated name-based, Automated name-based View Maps
AHGS1962 SSR 13.711 peanut - BB_A.ipaensis_x_A.magna_a - BB05 AHGS1962 SSR 61.972 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B05 AHGS1962 SSR 104.9 (cM) Automated name-based, Automated name-based View Maps
AHGS1672 SSR 13.836 No other positions
AHS1474_a2 SSR 13.848 No other positions
AHS2278_a2 SSR 13.848 No other positions
AHGS2127 SSR 13.866 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS2127 SSR 13.309 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B02 AHGS2127 SSR 45.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2127 SSR 35.156 (cM) Automated name-based, Automated name-based View Maps