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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AhCookUCDavisRGHHyb2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps FPC_Contig129
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
fpc_marker
GenomicClone_ActiveFinishing
GenomicClone_Finished
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AhCookUCDavisRGHHyb2 [ View Map Set Info ]
Map Name: FPC_Contig129
Map Start: 0 cM
Map Stop: 99 cM
Features by Type:
1 GenomicClone_ActiveFinishing
2 GenomicClone_Finished
1 fpc_marker
4 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 4 of 4.
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig129
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AR003O12 GenomicClone_Finished 31 - 93 No other positions
AR003O18 GenomicClone_Finished 28 - 91 No other positions
AR005C11 GenomicClone_ActiveFinishing 0 - 99 No other positions
set12 fpc_marker 62 peanut - AhCookUCDavisRGHHyb2 - FPC_Contig76 set12 fpc_marker 222 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig278 set12 fpc_marker 69 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig20 set12 fpc_marker 573 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig56 set12 fpc_marker 241 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig451 set12 fpc_marker 19 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig28 set12 fpc_marker 834 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig161 set12 fpc_marker 45 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig555 set12 fpc_marker 58 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig336 set12 fpc_marker 32 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig380 set12 fpc_marker 37 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig65 set12 fpc_marker 754 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig412 set12 fpc_marker 23 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig34 set12 fpc_marker 391 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig52 set12 fpc_marker 776 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig408 set12 fpc_marker 35 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig494 set12 fpc_marker 616 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig282 set12 fpc_marker 32 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig592 set12 fpc_marker 260 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig181 set12 fpc_marker 317 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig186 set12 fpc_marker 78 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig525 set12 fpc_marker 279 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig134 set12 fpc_marker 210 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig41 set12 fpc_marker 164 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig313 set12 fpc_marker 47 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig224 set12 fpc_marker 523 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig36 set12 fpc_marker 461 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig123 set12 fpc_marker 184 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig70 set12 fpc_marker 473 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig170 set12 fpc_marker 97 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig465 set12 fpc_marker 32 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig24 set12 fpc_marker 219 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig0 set12 fpc_marker 9,391 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig59 set12 fpc_marker 707 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig27 set12 fpc_marker 467 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig209 set12 fpc_marker 180 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig227 set12 fpc_marker 32 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig109 set12 fpc_marker 115 (cM) Automated name-based View Maps
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig469 set12 fpc_marker 120 (cM) Automated name-based View Maps