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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-AhCookUCDavisRGHHyb2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps FPC_Contig42
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone
fpc_marker
GenomicClone_ActiveFinishing
GenomicClone_Finished
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - AhCookUCDavisRGHHyb2 [ View Map Set Info ]
Map Name: FPC_Contig42
Map Start: 0 cM
Map Stop: 1,093 cM
Features by Type:
20 Clone
8 GenomicClone_ActiveFinishing
20 GenomicClone_Finished
1 SSR
6 fpc_marker
55 Total

Map Features

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Items 1 to 25 of 55.       of 3 | Next
peanut - AhCookUCDavisRGHHyb2 - FPC_Contig42
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AR005P15 GenomicClone_Finished 330 - 408 No other positions
AR008I08 GenomicClone_Finished 542 - 618 No other positions
AR008C11 GenomicClone_ActiveFinishing 661 - 716 No other positions
AR005F13 GenomicClone_Finished 151 - 239 No other positions
AR008L24 GenomicClone_Finished 3 - 131 No other positions
AR007O21 GenomicClone_Finished 483 - 578 No other positions
AR006N09 Clone 133 - 221 No other positions
AR007L06 GenomicClone_ActiveFinishing 300 - 407 No other positions
AR006P20 GenomicClone_Finished 483 - 566 No other positions
AR007F14 Clone 350 - 437 No other positions
AR008N06 GenomicClone_Finished 0 - 109 No other positions
AR008N06_ssr SSR 54.5 No other positions
AR010A05 GenomicClone_Finished 488 - 618 No other positions
AR009C21 GenomicClone_Finished 735 - 843 No other positions
AR007D17 Clone 218 - 280 No other positions
AR008E21 Clone 661 - 720 No other positions
AR006H05 GenomicClone_ActiveFinishing 235 - 302 No other positions
AR006B23 Clone 96 - 184 No other positions
AR008P19 GenomicClone_Finished 430 - 518 No other positions
AR007G09 GenomicClone_ActiveFinishing 960 - 1,093 No other positions
AR006L11 Clone 404 - 473 No other positions
AR007E08 GenomicClone_Finished 427 - 518 No other positions
AR007A02 GenomicClone_Finished 521 - 610 No other positions
AR008G09 Clone 666 - 717 No other positions
AR009O01 GenomicClone_ActiveFinishing 825 - 953 No other positions