LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-BAT93_x_JALOEEP558_c
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps PvLG01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - BAT93_x_JALOEEP558_c [ View Map Set Info ]
Map Name: PvLG01
Map Start: 0 cM
Map Stop: 145.5 cM
Features by Type:
78 SNP
78 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 78.       Previous | of 4 | Next
common bean - BAT93_x_JALOEEP558_c - PvLG01
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TOG963076_226 SNP 78.9 No other positions
TOG963076_539 SNP 78.9 No other positions
TOG901928_200 SNP 76.4 No other positions
TOG945583_486 SNP 74.8 No other positions
TOG894078_375 SNP 74 No other positions
TOG960456_224 SNP 74 No other positions
TOG960456_435 SNP 74 No other positions
TOG898369_503 SNP 73.2 No other positions
TOG900375_652 SNP 72.5 No other positions
TOG896448_605 SNP 71.7 No other positions
TOG905234_291 SNP 70.9 No other positions
TOG903904_203 SNP 70.1 No other positions
TOG910683_736 SNP 66.8 No other positions
TOG924240_197 SNP 64.3 No other positions
TOG912105_1330 SNP 63.5 No other positions
TOG903032_1755 SNP 59.4 No other positions
TOG897724_419 SNP 54.7 No other positions
TOG898832_447 SNP 54.7 No other positions
TOG898832_568 SNP 54.7 No other positions
TOG897009_457 SNP 53.9 No other positions
TOG897009_727 SNP 53.9 No other positions
TOG896186_314 SNP 52.3 No other positions
TOG896159_332 SNP 51.6 No other positions
TOG896159_536 SNP 51.6 No other positions
TOG896975_539 SNP 51.6 No other positions