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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-BB_A.ipaensis_x_A.magna_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps BB03
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_a [ View Map Set Info ]
Map Name: BB03
Map Start: 0 cM
Map Stop: 34.687 cM
Features by Type:
112 SSR
1 transposon
113 Total

Map Features

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Items 1 to 25 of 113.       of 5 | Next
peanut - BB_A.ipaensis_x_A.magna_a - BB03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS1843 SSR 0 No other positions
AHGS1786 SSR 0.695 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS1786 SSR 37.961 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1786 SSR 29.3 (cM) Automated name-based, Automated name-based View Maps
AHGS1571 SSR 1.139 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS1571 SSR 40.81 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1571 SSR 33.1 (cM) Automated name-based, Automated name-based View Maps
AHGS1552_b1 SSR 2.288 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1552_b1 SSR 28.5 (cM) Automated name-based, Automated name-based View Maps
AHGS1625 SSR 2.608 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS1625 SSR 35.441 (cM) Automated name-based, Automated name-based View Maps
TC1E06 SSR 2.902 peanut - TT_TAG24_x_ICGV86031_a - LG_AhIII TC1E06 SSR 10.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 TC1E06.A03 SSR 92.28 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 TC1E06 SSR 20.913 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A03 TC1E06 SSR 40.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B03 TC1E06.B03 SSR 202.71 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 TC1E06 SSR 30.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A03 TC1E06 SSR 157.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhIII TC1E06 SSR 10.4 (cM) Automated name-based, Automated name-based View Maps
AHGS1838 SSR 3.143 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1838 SSR 30 (cM) Automated name-based, Automated name-based View Maps
AHS1255 SSR 3.237 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHS1255 SSR 38.909 (cM) Automated name-based, Automated name-based View Maps
AHS3066 SSR 3.323 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHS3066 SSR 35.735 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHS3066 SSR 27 (cM) Automated name-based, Automated name-based View Maps
Ag140 SSR 3.45 peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 Ag140 SSR 92.28 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 Ag140 SSR 23.237 (cM) Automated name-based, Automated name-based View Maps
AHS1060 SSR 3.82 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHS1060 SSR 34.755 (cM) Automated name-based, Automated name-based View Maps
Ap175 SSR 3.917 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 Ap175 SSR 35.128 (cM) Automated name-based, Automated name-based View Maps
RI2D06 SSR 4.113 peanut - AA_A.duranensis_x_A.stenosperma_a - A03 RI2D06 SSR 233.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 RI2D06 SSR 34.517 (cM) Automated name-based, Automated name-based View Maps
AHGS2254 SSR 4.546 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS2254 SSR 26.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AHGS2254 SSR 20.864 (cM) Automated name-based, Automated name-based View Maps
AHGS2245 SSR 4.892 No other positions
AHGS3678 SSR 5.24 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS3678 SSR 31.7 (cM) Automated name-based, Automated name-based View Maps
AHGS1791_b1 SSR 5.882 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1791_b1 SSR 22.7 (cM) Automated name-based, Automated name-based View Maps
AHS1351 SSR 6.593 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA02 AHS1351 SSR 49.366 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHS1351 SSR 24.3 (cM) Automated name-based, Automated name-based View Maps
AHGS2309 SSR 6.775 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS2309 SSR 20 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS2309 SSR 31.334 (cM) Automated name-based, Automated name-based View Maps
AHGS1310 SSR 8.442 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS1310 SSR 45.208 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB03 AHGS1310 SSR 54.822 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS1310 SSR 36.1 (cM) Automated name-based, Automated name-based View Maps
AHGS1637 SSR 9.644 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA03 AHGS1637 SSR 26.527 (cM) Automated name-based, Automated name-based View Maps
AHS2357_b1 SSR 10.095 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHS2357_b1 SSR 102.3 (cM) Automated name-based, Automated name-based View Maps
AHGS1722 SSR 10.334 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B03 AHGS1722 SSR 48.784 (cM) Automated name-based, Automated name-based View Maps
AHGS1340 SSR 10.835 No other positions
AHGS3182_b1 SSR 11.269 peanut - BB_A.ipaensis_x_A.magna_b - B03 AHGS3182_b1 SSR 98.3 (cM) Automated name-based, Automated name-based View Maps