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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-BB_A.ipaensis_x_A.magna_a
(Reference Set)
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Maps BB08
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
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Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_a [ View Map Set Info ]
Map Name: BB08
Map Start: 0 cM
Map Stop: 29.407 cM
Features by Type:
60 SSR
1 transposon
61 Total

Map Features

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Items 1 to 25 of 61.       of 3 | Next
peanut - BB_A.ipaensis_x_A.magna_a - BB08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS2188_b2 SSR 0 No other positions
AHGS1383 SSR 8.5 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS1383 SSR 79.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS1383 SSR 49.629 (cM) Automated name-based, Automated name-based View Maps
AHS0227 SSR 9.189 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHS0227 SSR 49.945 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AHS0227 SSR 78.3 (cM) Automated name-based, Automated name-based View Maps
AHS2968 SSR 10.1 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHS2968 SSR 53.235 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AHS2968 SSR 76.7 (cM) Automated name-based, Automated name-based View Maps
AHS2892 SSR 10.621 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHS2892 SSR 77.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHS2892 SSR 43.919 (cM) Automated name-based, Automated name-based View Maps
AHGS2603 SSR 11.27 peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 AHGS2603 SSR 50.262 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS2603 SSR 77.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS2603 SSR 52.037 (cM) Automated name-based, Automated name-based View Maps
AHGS2665 SSR 11.478 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2665 SSR 47.264 (cM) Automated name-based, Automated name-based View Maps
AhTE0032 transposon 13.401 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0032 transposon 50.079 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AhTE0032 transposon 74.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AhTE0032 transposon 13.086 (cM) Automated name-based, Automated name-based View Maps
TC21D06_b1 SSR 14.47 No other positions
TC21D06_b2 SSR 14.47 No other positions
AHGS3235 SSR 15.537 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS3235 SSR 56.914 (cM) Automated name-based, Automated name-based View Maps
AHGS2571 SSR 15.906 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2571 SSR 56.33 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS2571 SSR 55 (cM) Automated name-based, Automated name-based View Maps
AHGS2619 SSR 16.415 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS2619 SSR 49.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AHGS2619 SSR 28.903 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2619 SSR 65.112 (cM) Automated name-based, Automated name-based View Maps
AHGS1451_b2 SSR 17.016 No other positions
AHGS2249_b1 SSR 17.265 No other positions
AHS1154_b1 SSR 17.373 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHS1154_b1 SSR 58.6 (cM) Automated name-based, Automated name-based View Maps
Seq16G10 SSR 17.702 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 Seq16G10 SSR 57.647 (cM) Automated name-based, Automated name-based View Maps
TC6H03 SSR 17.862 peanut - AA_A.duranensis_x_A.stenosperma_a - A08 TC6H03 SSR 61 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVIII TC6H03 SSR 72.4 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC6H03 SSR 107.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII TC6H03 SSR 31.853 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 TC6H03 SSR 64.468 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII TC6H03 SSR 41.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC6H03.A08 SSR 79.58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII TC6H03 SSR 77.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG01 Ah1TC6H03 SSR 10 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 TC6H03 SSR 58 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII TC6H03 SSR 77.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 TC6H03.B08 SSR 47.96 (cM) Automated name-based, Automated name-based View Maps
AHGS1250 SSR 18.19 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS1250 SSR 70.713 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS1250 SSR 63 (cM) Automated name-based, Automated name-based View Maps
AHGS2475 SSR 18.486 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2475 SSR 59.566 (cM) Automated name-based, Automated name-based View Maps
Seq2A06 SSR 18.785 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 seq2A06.B08 SSR 103.66 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 Seq2A06 SSR 53.2 (cM) Automated name-based, Automated name-based View Maps
AHS1969 SSR 18.829 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHS1969 SSR 66.166 (cM) Automated name-based, Automated name-based View Maps
AHGS1980_b3 SSR 19.077 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS1980_b3 SSR 52 (cM) Automated name-based, Automated name-based View Maps
AHGS0238 SSR 19.208 peanut - BB_A.ipaensis_x_A.magna_b - B08 AHGS0238 SSR 50.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08 AHGS0238 SSR 26.629 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS0238 SSR 63.84 (cM) Automated name-based, Automated name-based View Maps
Ah1 SSR 19.333 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 Ah1 SSR 69.97 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 Ah1 SSR 63.155 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B08 Ah1 SSR 52.6 (cM) Automated name-based, Automated name-based View Maps