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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-BB_A.ipaensis_x_A.magna_a
(Reference Set)
Min.
Correspondences
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Maps BB09
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
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Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_a [ View Map Set Info ]
Map Name: BB09
Map Start: 0 cM
Map Stop: 44.761 cM
Features by Type:
88 SSR
3 transposon
91 Total

Map Features

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Items 1 to 25 of 91.       of 4 | Next
peanut - BB_A.ipaensis_x_A.magna_a - BB09
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS3747 SSR 0 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA07 AHGS3747 SSR 19.103 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS3747 SSR 33.2 (cM) Automated name-based, Automated name-based View Maps
AHS3091 SSR 1.669 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHS3091 SSR 58.463 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS3091 SSR 1.2 (cM) Automated name-based, Automated name-based View Maps
AHS0486 SSR 2.613 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS0486 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHS0486 SSR 59.34 (cM) Automated name-based, Automated name-based View Maps
AHGS1790_b2 SSR 4.932 No other positions
AHS1566 SSR 6.204 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHS1566 SSR 63.442 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS1566 SSR 2.4 (cM) Automated name-based, Automated name-based View Maps
AHGS3620 SSR 7.624 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS3620 SSR 80.25 (cM) Automated name-based, Automated name-based View Maps
AHS3088 SSR 8.444 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS3088 SSR 81.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHS3088 SSR 81.018 (cM) Automated name-based, Automated name-based View Maps
AHS1760 SSR 9.039 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHS1760 SSR 48.104 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS1760 SSR 13.9 (cM) Automated name-based, Automated name-based View Maps
AHS0452 SSR 10.058 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHS0452 SSR 74.959 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS0452 SSR 25 (cM) Automated name-based, Automated name-based View Maps
AHGS3732 SSR 10.296 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS3732 SSR 63.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS3732 SSR 16.05 (cM) Automated name-based, Automated name-based View Maps
AHGS1478_b3 SSR 10.537 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS1478_b3 SSR 72.9 (cM) Automated name-based, Automated name-based View Maps
AhTE0101 transposon 10.987 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AhTE0101 transposon 65.018 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AhTE0101 transposon 21.399 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AhTE0101 transposon 45.8 (cM) Automated name-based, Automated name-based View Maps
AHGS1372 SSR 11.088 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AHGS1372 SSR 19.28 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS1372 SSR 78.665 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS1372 SSR 47.3 (cM) Automated name-based, Automated name-based View Maps
AHGS2041 SSR 11.27 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS2041 SSR 75.923 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS2041 SSR 40.6 (cM) Automated name-based, Automated name-based View Maps
AHGS2722 SSR 11.389 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2722 SSR 36.157 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS2722 SSR 36.8 (cM) Automated name-based, Automated name-based View Maps
AHGS2341 SSR 11.535 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2341 SSR 80.769 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS2341 SSR 41.3 (cM) Automated name-based, Automated name-based View Maps
AHGS2154 SSR 11.697 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS2154 SSR 74.126 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AHGS2154 SSR 20.19 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS2154 SSR 46.8 (cM) Automated name-based, Automated name-based View Maps
AHGS2970 SSR 11.816 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB09 AHGS2970 SSR 19.076 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS2970 SSR 69.088 (cM) Automated name-based, Automated name-based View Maps
AHGS1445 SSR 12.065 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS1445 SSR 65.887 (cM) Automated name-based, Automated name-based View Maps
AHGS2016 SSR 12.325 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS2016 SSR 29.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2016 SSR 33.539 (cM) Automated name-based, Automated name-based View Maps
AHGS1289 SSR 12.655 peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 AHGS1289 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS1289 SSR 60.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA02 AHGS1289 SSR 14.57 (cM) Automated name-based, Automated name-based View Maps
AHGS1156 SSR 12.84 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS1156 SSR 75.609 (cM) Automated name-based, Automated name-based View Maps
AHGS3224 SSR 12.987 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B09 AHGS3224 SSR 68.77 (cM) Automated name-based, Automated name-based View Maps
AHS1022_b2 SSR 13.362 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS1022_b2 SSR 25.9 (cM) Automated name-based, Automated name-based View Maps
AHGS1754_b2 SSR 13.56 peanut - BB_A.ipaensis_x_A.magna_b - B09 AHGS1754_b2 SSR 48.9 (cM) Automated name-based, Automated name-based View Maps