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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-BB_A.ipaensis_x_A.magna_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps BB10
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_a [ View Map Set Info ]
Map Name: BB10
Map Start: 0 cM
Map Stop: 43.927 cM
Features by Type:
76 SSR
3 transposon
79 Total

Map Features

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Items 1 to 25 of 79.       of 4 | Next
peanut - BB_A.ipaensis_x_A.magna_a - BB10
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS1727 SSR 0 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1727 SSR 29.1 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 AHGS1727 SSR 3.899 (cM) Automated name-based, Automated name-based View Maps
AHGS1905 SSR 9.251 No other positions
AHGS1367 SSR 11.552 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1367 SSR 52.606 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1367 SSR 21.9 (cM) Automated name-based, Automated name-based View Maps
AHGS1532 SSR 13.08 No other positions
AHGS2694 SSR 13.777 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2694 SSR 54.853 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS2694 SSR 37.6 (cM) Automated name-based, Automated name-based View Maps
AHGS2719 SSR 14.525 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2719 SSR 69.389 (cM) Automated name-based, Automated name-based View Maps
AHGS2537_b3 SSR 15.169 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS2537_b3 SSR 27.5 (cM) Automated name-based, Automated name-based View Maps
AHS0714 SSR 15.832 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHS0714 SSR 26.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS0714 SSR 55.987 (cM) Automated name-based, Automated name-based View Maps
AHGS0300 SSR 16.306 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS0300 SSR 54.301 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS0300 SSR 21.958 (cM) Automated name-based, Automated name-based View Maps
AHS1306 SSR 16.775 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHS1306 SSR 41.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1306 SSR 58.846 (cM) Automated name-based, Automated name-based View Maps
TC1G04 SSR 17.2 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 TC1G04 SSR 17.41 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG05 Ah1TC1G04 SSR 19.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIV TC1G04 SSR 60.972 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A02 TC1G04 SSR 86.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A10 TC1G04 SSR 63.05 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A10 TC1G04 SSR 32.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIV TC1G04 SSR 136.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 TC1G04 SSR 3.325 (cM) Automated name-based, Automated name-based View Maps
AHGS2667 SSR 17.46 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS2667 SSR 30.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2667 SSR 57.941 (cM) Automated name-based, Automated name-based View Maps
AHS1875 SSR 17.664 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1875 SSR 59.464 (cM) Automated name-based, Automated name-based View Maps
AHGS2547 SSR 17.932 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS2547 SSR 19.607 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 AHGS2547 SSR 7.203 (cM) Automated name-based, Automated name-based View Maps
AHS1026 SSR 18.168 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1026 SSR 58.458 (cM) Automated name-based, Automated name-based View Maps
AHGS2710 SSR 18.339 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS2710 SSR 20.788 (cM) Automated name-based, Automated name-based View Maps
AHS2441 SSR 18.576 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHS2441 SSR 20.072 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 AHS2441 SSR 9.977 (cM) Automated name-based, Automated name-based View Maps
AHS0138 SSR 18.902 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS0138 SSR 59.954 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHS0138 SSR 49.9 (cM) Automated name-based, Automated name-based View Maps
AhTE0599 transposon 19.188 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 AhTE0599 transposon 8.188 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AhTE0599 transposon 53.1 (cM) Automated name-based, Automated name-based View Maps
AHS1154_b2 SSR 19.478 No other positions
AHGS0283_b2 SSR 19.578 No other positions
AHGS1275 SSR 19.745 peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1275 SSR 55.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS1275 SSR 23.271 (cM) Automated name-based, Automated name-based View Maps
AHGS3622 SSR 19.951 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS3622 SSR 22.403 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS3622 SSR 59.746 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS3622 SSR 53.1 (cM) Automated name-based, Automated name-based View Maps
AHGS1875 SSR 19.953 No other positions
AHS1898 SSR 19.976 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1898 SSR 60.831 (cM) Automated name-based, Automated name-based View Maps