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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-BB_A.ipaensis_x_A.magna_b
(Reference Set)
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Correspondences
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Maps B02
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_b [ View Map Set Info ]
Map Name: B02
Map Start: 0 cM
Map Stop: 71.3 cM
Features by Type:
33 SSR
1 transposon
34 Total

Map Features

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Items 1 to 25 of 34.       of 2 | Next
peanut - BB_A.ipaensis_x_A.magna_b - B02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Ah282 SSR 0 No other positions
Seq13B09 SSR 15.2 No other positions
Ah-331 SSR 19.1 No other positions
RN20C10 SSR 19.1 peanut - BB_A.ipaensis_x_A.magna_a - BB02 RN20C10 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 RN20C10 SSR 10.416 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A02 RN20C10 SSR 27.4 (cM) Automated name-based, Automated name-based View Maps
AHS0046 SSR 19.9 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS0046 SSR 2.279 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHS0046 SSR 50.81 (cM) Automated name-based, Automated name-based View Maps
AHGS2726 SSR 22.6 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 AHGS2726 SSR 57.588 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS2726 SSR 5.009 (cM) Automated name-based, Automated name-based View Maps
AHS0808 SSR 23.1 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS0808 SSR 6.429 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHS0808 SSR 55.702 (cM) Automated name-based, Automated name-based View Maps
AHGS1692_b1 SSR 26.5 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1692_b1 SSR 3.905 (cM) Automated name-based, Automated name-based View Maps
AHGS1355 SSR 30.9 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1355 SSR 8.069 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB02 AHGS1355 SSR 14.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHGS1355 SSR 55.031 (cM) Automated name-based, Automated name-based View Maps
AHS0277 SSR 34.6 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS0277 SSR 16.489 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHS0277 SSR 61.024 (cM) Automated name-based, Automated name-based View Maps
AHGS1853 SSR 36.6 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1853 SSR 20.869 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 AHGS1853 SSR 31.294 (cM) Automated name-based, Automated name-based View Maps
PM32 SSR 37.6 peanut - AA_A.duranensis_x_A.stenosperma_d - A08 PM32 SSR 83.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG11 PM32 SSR 64.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A02 PM32 SSR 202.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 PM32 SSR 16.767 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 PM32 SSR 38.535 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 PM32.B02 SSR 99.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A02 PM32.A02 SSR 44.04 (cM) Automated name-based, Automated name-based View Maps
AHS3074 SSR 38.4 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHS3074 SSR 63.35 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS3074 SSR 13.815 (cM) Automated name-based, Automated name-based View Maps
AHGS2715 SSR 38.9 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS2715 SSR 7.184 (cM) Automated name-based, Automated name-based View Maps
AHGS1393 SSR 40 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB02 AHGS1393 SSR 20.158 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHGS1393 SSR 64.436 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1393 SSR 12.463 (cM) Automated name-based, Automated name-based View Maps
AHGS1531 SSR 41.1 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1531 SSR 13.559 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 AHGS1531 SSR 30.201 (cM) Automated name-based, Automated name-based View Maps
AHGS3761 SSR 41.6 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHGS3761 SSR 64.197 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS3761 SSR 13.747 (cM) Automated name-based, Automated name-based View Maps
AHGS1193_b1 SSR 42.1 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1193_b1 SSR 13.429 (cM) Automated name-based, Automated name-based View Maps
AHS1117 SSR 42.8 peanut - AA_A.duranensis_x_A.stenosperma_b - AA01 AHS1117 SSR 14.402 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS1117 SSR 12.615 (cM) Automated name-based, Automated name-based View Maps
AHGS1967 SSR 44.3 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA04 AHGS1967 SSR 56.316 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1967 SSR 14.96 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 AHGS1967 SSR 22.639 (cM) Automated name-based, Automated name-based View Maps
AHGS2127 SSR 45.9 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS2127 SSR 13.309 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA09 AHGS2127 SSR 35.156 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA09 AHGS2127 SSR 13.866 (cM) Automated name-based, Automated name-based View Maps
AHS0050 SSR 47.6 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHS0050 SSR 63.535 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHS0050 SSR 14.078 (cM) Automated name-based, Automated name-based View Maps
AHGS1360 SSR 48.6 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS1360 SSR 16.055 (cM) Automated name-based, Automated name-based View Maps
AHGS3763 SSR 52.6 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS3763 SSR 11.721 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 AHGS3763 SSR 66.939 (cM) Automated name-based, Automated name-based View Maps
AHGS3724 SSR 53.2 peanut - BB_A.ipaensis_x_A.magna_a - BB02 AHGS3724 SSR 15.298 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA02 AHGS3724 SSR 13.014 (cM) Automated name-based, Automated name-based View Maps