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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-BB_A.ipaensis_x_A.magna_b
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps B10
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - BB_A.ipaensis_x_A.magna_b [ View Map Set Info ]
Map Name: B10
Map Start: 0 cM
Map Stop: 101.4 cM
Features by Type:
34 SSR
3 transposon
37 Total

Map Features

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Items 1 to 25 of 37.       of 2 | Next
peanut - BB_A.ipaensis_x_A.magna_b - B10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq13D1A# SSR 0 No other positions
Seq2G05 SSR 9.8 peanut - AA_A.duranensis_x_A.stenosperma_a - A02 Seq2G05 SSR 187.3 (cM) Automated name-based, Automated name-based View Maps
AHGS1669 SSR 19.1 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1669 SSR 47.411 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1669 SSR 28.295 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS1669 SSR 25.72 (cM) Automated name-based, Automated name-based View Maps
AHGS1367 SSR 21.9 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1367 SSR 11.552 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1367 SSR 52.606 (cM) Automated name-based, Automated name-based View Maps
AHGS1708 SSR 24.7 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1708 SSR 51.006 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1708 SSR 28.504 (cM) Automated name-based, Automated name-based View Maps
AHS0714 SSR 26.9 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHS0714 SSR 15.832 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS0714 SSR 55.987 (cM) Automated name-based, Automated name-based View Maps
AHGS2537_b3 SSR 27.5 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS2537_b3 SSR 15.169 (cM) Automated name-based, Automated name-based View Maps
AHGS1727 SSR 29.1 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1727 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 AHGS1727 SSR 3.899 (cM) Automated name-based, Automated name-based View Maps
AHGS2667 SSR 30.1 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS2667 SSR 17.46 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2667 SSR 57.941 (cM) Automated name-based, Automated name-based View Maps
AHGS2694 SSR 37.6 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS2694 SSR 13.777 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2694 SSR 54.853 (cM) Automated name-based, Automated name-based View Maps
AHS1306 SSR 41.6 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1306 SSR 58.846 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHS1306 SSR 16.775 (cM) Automated name-based, Automated name-based View Maps
TC22F10 SSR 46.9 peanut - BB_A.ipaensis_x_A.magna_a - BB10 TC22F10 SSR 25.266 (cM) Automated name-based, Automated name-based View Maps
AHS0138 SSR 49.9 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHS0138 SSR 18.902 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS0138 SSR 59.954 (cM) Automated name-based, Automated name-based View Maps
AC2C02 SSR 50.9 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AC2C02 SSR 21.818 (cM) Automated name-based, Automated name-based View Maps
AHGS1595 SSR 52 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1595 SSR 67.59 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS1595 SSR 20.215 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1595 SSR 21.6 (cM) Automated name-based, Automated name-based View Maps
AHGS3622 SSR 53.1 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS3622 SSR 22.403 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS3622 SSR 19.951 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS3622 SSR 59.746 (cM) Automated name-based, Automated name-based View Maps
AhTE0599 transposon 53.1 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AhTE0599 transposon 19.188 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 AhTE0599 transposon 8.188 (cM) Automated name-based, Automated name-based View Maps
AHGS1275 SSR 55.3 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS1275 SSR 23.271 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1275 SSR 19.745 (cM) Automated name-based, Automated name-based View Maps
AHGS1395 SSR 56.4 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1395 SSR 20.249 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1395 SSR 61.836 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10 AHGS1395 SSR 20.423 (cM) Automated name-based, Automated name-based View Maps
AHGS1778_b3 SSR 57.5 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1778_b3 SSR 20.85 (cM) Automated name-based, Automated name-based View Maps
AHGS2680_b2 SSR 60.3 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS2680_b2 SSR 21.36 (cM) Automated name-based, Automated name-based View Maps
AHGS1547 SSR 63.5 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1547 SSR 25.552 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA10 AHGS1547 SSR 9.081 (cM) Automated name-based, Automated name-based View Maps
AHS1488 SSR 64.9 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHS1488 SSR 75.961 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHS1488 SSR 34.968 (cM) Automated name-based, Automated name-based View Maps
AHGS2110 SSR 65.5 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS2110 SSR 23.78 (cM) Automated name-based, Automated name-based View Maps
AHGS1175 SSR 66.2 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 AHGS1175 SSR 29.508 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1175 SSR 23.326 (cM) Automated name-based, Automated name-based View Maps