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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps O
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Isozyme
Marker
QTL_fungal
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmComposite2003 [ View Map Set Info ]
Map Name: O
Map Start: 0 cM
Map Stop: 143.73 cM
Features by Type:
2 Gene
1 Isozyme
1 Marker
14 QTL_fungal
7 QTL_leaf-stem
4 QTL_nematode
1 QTL_oil
4 QTL_other-seed
3 QTL_pod
2 QTL_protein
1 QTL_reprod-period
2 QTL_whole-plant
2 QTL_yield
2 RAPD
32 RFLP
52 SNP
72 SSR
202 Total

Map Features

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Items 1 to 25 of 202.       of 9 | Next
soybean - GmComposite2003 - O
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Pod mat 14-2 QTL_pod 99.38 - 101.38 No other positions
Pl ht 18-2 QTL_whole-plant 99.38 - 101.38 No other positions
Pl ht 17-8 QTL_whole-plant 70.1 - 72.1 No other positions
Sclero 2-22 QTL_fungal 70.1 - 72.1 No other positions
Sclero 2-23 QTL_fungal 82.09 - 86.86 No other positions
Sclero 2-24 QTL_fungal 126.5 - 128.5 No other positions
Sclero 3-17 QTL_fungal 70.1 - 72.1 No other positions
Sclero 3-18 QTL_fungal 82.09 - 86.86 No other positions
Sclero 3-19 QTL_fungal 119.5 - 127.5 No other positions
Sclero 4-10 QTL_fungal 82.09 - 86.86 No other positions
Sclero 4-11 QTL_fungal 126.5 - 128.5 No other positions
Sclero 5-14 QTL_fungal 70.1 - 72.1 No other positions
Sclero 5-15 QTL_fungal 81.09 - 83.09 No other positions
Sclero 5-16 QTL_fungal 119.5 - 127.5 No other positions
Sclero 6-11 QTL_fungal 70.1 - 72.1 No other positions
Sclero 6-12 QTL_fungal 81.09 - 83.09 No other positions
Sclero 6-13 QTL_fungal 119.5 - 129.3 No other positions
Oil 19-3 QTL_oil 49.71 - 54.2 No other positions
Sd wt 12-2 QTL_other-seed 63 - 65 No other positions
Sd wt 12-6 QTL_other-seed 4.44 - 6.44 No other positions
Sd wt 12-7 QTL_other-seed 81.09 - 83.09 No other positions
Prot 12-5 QTL_protein 70.1 - 72.1 No other positions
Pod mat 13-8 QTL_pod 128.3 - 130.3 No other positions
Lflt area 1-6 QTL_leaf-stem 7.3 - 9.3 No other positions
Mi 1-1 QTL_nematode 36.75 - 38.75 No other positions