LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmCons30cM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmCons30cM [ View Map Set Info ]
Map Name: H
Map Start: 0 cM
Map Stop: 116.52 cM
Features by Type:
35 SNP
35 SSR
70 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 70.       of 3 | Next
soybean - GmCons30cM - H
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Satt666 SSR 0.59 soybean - GmCons40cM - H Satt666 SSR 5.76 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Satt666 SSR 0.59 (cM) Automated name-based, Automated name-based View Maps
Sat_214 SSR 2.85 soybean - GmCons40cM - H Sat_214 SSR 4.53 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Sat_214 SSR 2.85 (cM) Automated name-based, Automated name-based View Maps
Sat_200 SSR 3.02 soybean - GmComposite2003 - H Sat_200 SSR 3.02 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H Sat_200 SSR 5.14 (cM) Automated name-based, Automated name-based View Maps
BARC-016111-02282 SNP 4.15 soybean - GmComposite2003 - H BARC-016111-02282 SNP 4.15 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-016111-02282 SNP 6.75 (cM) Automated name-based, Automated name-based View Maps
BARC-017533-03065 SNP 4.15 soybean - GmCons40cM - H BARC-017533-03065 SNP 6.79 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-017533-03065 SNP 4.15 (cM) Automated name-based, Automated name-based View Maps
Satt635 SSR 4.88 soybean - GmComposite2003 - H Satt635 SSR 4.88 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H Satt635 SSR 8.56 (cM) Automated name-based, Automated name-based View Maps
BARC-013475-00496 SNP 7.1 soybean - GmCons40cM - H BARC-013475-00496 SNP 9.8 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-013475-00496 SNP 7.1 (cM) Automated name-based, Automated name-based View Maps
BARC-028499-05924 SNP 7.1 soybean - GmComposite2003 - H BARC-028499-05924 SNP 7.1 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-028499-05924 SNP 9.74 (cM) Automated name-based, Automated name-based View Maps
Satt353 SSR 8.48 soybean - GmCons40cM - H Satt353 SSR 13.31 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Satt353 SSR 8.48 (cM) Automated name-based, Automated name-based View Maps
BARC-030241-06838 SNP 10.43 soybean - GmComposite2003 - H BARC-030241-06838 SNP 10.43 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-030241-06838 SNP 13.39 (cM) Automated name-based, Automated name-based View Maps
BARC-017095-02197 SNP 12.91 soybean - GmCons40cM - H BARC-017095-02197 SNP 21.32 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-017095-02197 SNP 12.9 (cM) Automated name-based, Automated name-based View Maps
BARC-016413-02582 SNP 12.96 soybean - GmCons40cM - H BARC-016413-02582 SNP 15.02 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-016413-02582 SNP 12.95 (cM) Automated name-based, Automated name-based View Maps
BARC-020589-04684 SNP 13.65 soybean - GmComposite2003 - H BARC-020589-04684 SNP 13.65 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-020589-04684 SNP 15.95 (cM) Automated name-based, Automated name-based View Maps
BARC-021905-04234 SNP 13.65 soybean - GmCons40cM - H BARC-021905-04234 SNP 15.93 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-021905-04234 SNP 13.65 (cM) Automated name-based, Automated name-based View Maps
BARC-043061-08513 SNP 15.85 soybean - GmCons40cM - H BARC-043061-08513 SNP 18.9 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-043061-08513 SNP 15.85 (cM) Automated name-based, Automated name-based View Maps
Satt568 SSR 27.64 soybean - GmCons40cM - H Satt568 SSR 27.51 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Satt568 SSR 27.63 (cM) Automated name-based, Automated name-based View Maps
Sat_127 SSR 28.8 soybean - GmComposite2003 - H Sat_127 SSR 28.79 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H Sat_127 SSR 26.65 (cM) Automated name-based, Automated name-based View Maps
BARC-014353-01329 SNP 39.86 soybean - GmComposite2003 - H BARC-014353-01329 SNP 39.86 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-014353-01329 SNP 36.57 (cM) Automated name-based, Automated name-based View Maps
BARC-041917-08135 SNP 41.23 soybean - GmCons40cM - H BARC-041917-08135 SNP 43.68 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-041917-08135 SNP 41.22 (cM) Automated name-based, Automated name-based View Maps
Satt192 SSR 44.04 soybean - GmComposite2003 - H Satt192 SSR 44.04 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H Satt192 SSR 40.92 (cM) Automated name-based, Automated name-based View Maps
BARC-019775-04370 SNP 45.51 soybean - GmComposite2003 - H BARC-019775-04370 SNP 45.51 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-019775-04370 SNP 49.41 (cM) Automated name-based, Automated name-based View Maps
Satt442 SSR 46.95 soybean - GmCons40cM - H Satt442 SSR 43.39 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Satt442 SSR 46.95 (cM) Automated name-based, Automated name-based View Maps
BARC-021659-04168 SNP 47.71 soybean - GmComposite2003 - H BARC-021659-04168 SNP 47.7 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons40cM - H BARC-021659-04168 SNP 42.71 (cM) Automated name-based, Automated name-based View Maps
Satt541 SSR 53.35 soybean - GmCons40cM - H Satt541 SSR 68.76 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H Satt541 SSR 53.34 (cM) Automated name-based, Automated name-based View Maps
BARC-032147-07327 SNP 55.13 soybean - GmCons40cM - H BARC-032147-07327 SNP 52.74 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - H BARC-032147-07327 SNP 55.13 (cM) Automated name-based, Automated name-based View Maps