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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set soybean-GmCons40cM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D1a
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: soybean - GmCons40cM [ View Map Set Info ]
Map Name: D1a
Map Start: 0 cM
Map Stop: 97.29 cM
Features by Type:
130 SNP
51 SSR
181 Total

Map Features

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Items 1 to 25 of 181.       of 8 | Next
soybean - GmCons40cM - D1a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BARC-060173-16441 SNP 97.29 No other positions
BARC-018211-03157 SNP 97.29 No other positions
BARC-063115-18246 SNP 97.28 No other positions
BARC-007726-00090 SNP 95.23 soybean - GmCons30cM - D1a BARC-007726-00090 SNP 115 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-007726-00090 SNP 115 (cM) Automated name-based, Automated name-based View Maps
BARC-039253-07488 SNP 94.9 No other positions
BARC-042795-08412 SNP 94.86 soybean - GmComposite2003 - D1a BARC-042795-08412 SNP 106.07 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a BARC-042795-08412 SNP 106.08 (cM) Automated name-based, Automated name-based View Maps
BARC-040447-07743 SNP 94.2 soybean - GmComposite2003 - D1a BARC-040447-07743 SNP 106.07 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a BARC-040447-07743 SNP 106.07 (cM) Automated name-based, Automated name-based View Maps
BARC-010381-00621 SNP 94.2 No other positions
BARC-051047-10962 SNP 94.2 No other positions
BARC-044951-08843 SNP 93.8 soybean - GmCons30cM - D1a BARC-044951-08843 SNP 106.08 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-044951-08843 SNP 106.07 (cM) Automated name-based, Automated name-based View Maps
BARC-043251-08566 SNP 93.76 soybean - GmCons30cM - D1a BARC-043251-08566 SNP 106.08 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-043251-08566 SNP 106.07 (cM) Automated name-based, Automated name-based View Maps
Satt129 SSR 93.5 soybean - GmCons30cM - D1a Satt129 SSR 109.67 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a Satt129 SSR 109.66 (cM) Automated name-based, Automated name-based View Maps
BARC-008009-00213 SNP 93.22 soybean - GmCons30cM - D1a BARC-008009-00213 SNP 107.85 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-008009-00213 SNP 107.84 (cM) Automated name-based, Automated name-based View Maps
BARC-039703-07556 SNP 92.97 soybean - GmComposite2003 - D1a BARC-039703-07556 SNP 107.84 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a BARC-039703-07556 SNP 107.85 (cM) Automated name-based, Automated name-based View Maps
BARC-032411-08968 SNP 92.96 soybean - GmCons30cM - D1a BARC-032411-08968 SNP 105.24 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-032411-08968 SNP 105.24 (cM) Automated name-based, Automated name-based View Maps
BARC-035219-07139 SNP 92.81 No other positions
BARC-025941-05177 SNP 92.81 No other positions
Satt147 SSR 92.53 soybean - GmComposite2003 - D1a Satt147 SSR 108.88 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a Satt147 SSR 108.89 (cM) Automated name-based, Automated name-based View Maps
BARC-018835-03260 SNP 91.32 soybean - GmCons30cM - D1a BARC-018835-03260 SNP 105.72 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-018835-03260 SNP 105.71 (cM) Automated name-based, Automated name-based View Maps
Satt408 SSR 90.07 soybean - GmComposite2003 - D1a Satt408 SSR 106.69 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a Satt408 SSR 106.69 (cM) Automated name-based, Automated name-based View Maps
Sat_160 SSR 87.97 soybean - GmComposite2003 - D1a Sat_160 SSR 104.27 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a Sat_160 SSR 104.28 (cM) Automated name-based, Automated name-based View Maps
Satt407 SSR 87.81 soybean - GmComposite2003 - D1a Satt407 SSR 99.58 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a Satt407 SSR 99.59 (cM) Automated name-based, Automated name-based View Maps
BARC-030807-06945 SNP 85.93 soybean - GmComposite2003 - D1a BARC-030807-06945 SNP 102.96 (cM) Automated name-based, Automated name-based View Maps
soybean - GmCons30cM - D1a BARC-030807-06945 SNP 102.96 (cM) Automated name-based, Automated name-based View Maps
BARC-039805-07589 SNP 83.8 soybean - GmCons30cM - D1a BARC-039805-07589 SNP 98.71 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a BARC-039805-07589 SNP 98.71 (cM) Automated name-based, Automated name-based View Maps
Satt071 SSR 82.88 soybean - GmCons30cM - D1a Satt071 SSR 100.38 (cM) Automated name-based, Automated name-based View Maps
soybean - GmComposite2003 - D1a Satt071 SSR 100.38 (cM) Automated name-based, Automated name-based View Maps