LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set lotus-LjKazusa200905
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LjChr0
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
TOG
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: lotus - LjKazusa200905 [ View Map Set Info ]
Map Name: LjChr0
Map Start: 0 cM
Map Stop: 37,932,529 cM
Features by Type:
185 Marker
140 TOG
325 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 325.       of 13 | Next
lotus - LjKazusa200905 - LjChr0
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
VuMucheroUCRiverside2009_5_1_0624 Marker 12,853,043 - 12,853,426 barrel medic - Mt3.0 - MtChr2 VuMucheroUCRiverside2009_5_1_0624 Marker 2,618,226 - 2,618,591 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm14 VuMucheroUCRiverside2009_5_1_0624 Marker 8,471,453 - 8,471,830 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - scaffold_41 VuMucheroUCRiverside2009_5_1_0624 Marker 74,162 - 78,276 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_11_1_0996 Marker 26,642,207 - 26,642,704 soybean - GmJGI8x - Gm19 VuMucheroUCRiverside2009_11_1_0996 Marker 8,276,306 - 8,344,949 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm19 VuMucheroUCRiverside2009_11_1_0996 Marker 8,081,615 - 8,081,857 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr6 VuMucheroUCRiverside2009_11_1_0996 Marker 5,242,521 - 5,242,784 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_3_g2108 Marker 30,593,308 - 30,593,457 barrel medic - Mt3.0 - MtChr5 PvMcCleanNDSU2007_3_g2108 Marker 24,900,343 - 24,900,474 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 PvMcCleanNDSU2007_3_g2108 Marker 27,964,186 - 27,964,314 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 PvMcCleanNDSU2007_3_g2108 Marker 9,219,299 - 9,219,713 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0364 Marker 24,713,949 - 24,714,236 soybean - GmJGI8x - Gm06 VuMucheroUCRiverside2009_4_1_0364 Marker 50,141,337 - 50,141,885 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_4_1_0364 Marker 1,707,600 - 1,708,115 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm04 VuMucheroUCRiverside2009_4_1_0364 Marker 13,109,868 - 13,195,995 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_1356 Marker 31,672,616 - 31,672,882 barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_10_1_1356 Marker 8,863,871 - 8,864,140 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_10_1_1356 Marker 44,319,508 - 44,319,777 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_10_1_1356 Marker 43,574,272 - 43,574,481 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0352 Marker 31,064,587 - 31,064,916 soybean - GmJGI8x - Gm09 VuMucheroUCRiverside2009_3_1_0352 Marker 40,847,770 - 40,848,105 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr5 VuMucheroUCRiverside2009_3_1_0352 Marker 11,177,548 - 11,177,886 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_3_1_0352 Marker 19,294,379 - 19,298,546 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_9_1_0358 Marker 20,003,812 - 20,004,174 soybean - GmJGI8x - Gm12 VuMucheroUCRiverside2009_9_1_0358 Marker 39,111,473 - 39,111,841 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 VuMucheroUCRiverside2009_9_1_0358 Marker 18,425,478 - 18,428,356 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_9_1_0358 Marker 12,991,269 - 12,991,640 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_7_1_1186 Marker 15,953,200 - 15,953,391 soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_7_1_1186 Marker 5,649,918 - 5,650,400 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr5 VuMucheroUCRiverside2009_7_1_1186 Marker 8,329,515 - 8,329,703 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_17_R2091EcB Marker 12,550,332 - 12,550,475 soybean - GmJGI8x - Gm04 AhBurow2001_17_R2091EcB Marker 45,589,868 - 45,590,017 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 AhBurow2001_17_R2091EcB Marker 37,312,420 - 37,312,575 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm06 AhBurow2001_17_R2091EcB Marker 12,230,426 - 12,230,840 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0417 Marker 6,377,851 - 6,378,078 barrel medic - Mt3.0 - MtChr7 VuMucheroUCRiverside2009_4_1_0417 Marker 31,749,969 - 31,750,190 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_4_1_0417 Marker 44,857,552 - 44,863,780 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm19 VuMucheroUCRiverside2009_4_1_0417 Marker 47,441,305 - 47,441,526 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_2_g1063 Marker 6,209,309 - 6,209,542 barrel medic - Mt3.0 - MtChr4 PvMcCleanNDSU2007_2_g1063 Marker 36,288,190 - 36,288,423 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 PvMcCleanNDSU2007_2_g1063 Marker 329,677 - 329,997 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 PvMcCleanNDSU2007_2_g1063 Marker 37,813,031 - 37,838,987 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0820 Marker 11,049,810 - 11,050,043 soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0820 Marker 7,167,174 - 7,168,993 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_3_1_0820 Marker 28,759,492 - 28,759,668 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0820 Marker 1,667,637 - 1,667,933 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_4_S1027EaD Marker 5,727,528 - 5,727,770 soybean - GmJGI8x - Gm03 AhBurow2001_4_S1027EaD Marker 43,726,375 - 43,726,692 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 AhBurow2001_4_S1027EaD Marker 1,420,362 - 1,425,996 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr1 AhBurow2001_4_S1027EaD Marker 22,884,768 - 22,885,010 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_4_AL372597 Marker 6,168,122 - 6,168,235 barrel medic - Mt3.0 - MtChr4 MtYoungUMinn2006_4_AL372597 Marker 36,235,434 - 36,235,751 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 MtYoungUMinn2006_4_AL372597 Marker 37,772,928 - 37,773,041 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 MtYoungUMinn2006_4_AL372597 Marker 299,822 - 300,017 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_0652 Marker 10,855,249 - 10,855,356 soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_2_1_0652 Marker 45,475,689 - 45,480,072 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr1 VuMucheroUCRiverside2009_2_1_0652 Marker 28,099,325 - 28,099,432 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm09 VuMucheroUCRiverside2009_2_1_0652 Marker 29,949,290 - 29,949,397 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_8_GLO3 Marker 35,805,948 - 35,806,178 soybean - GmJGI8x - Gm08 MtYoungUMinn2006_8_GLO3 Marker 34,898,350 - 34,901,468 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 MtYoungUMinn2006_8_GLO3 Marker 15,975,761 - 15,975,985 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 MtYoungUMinn2006_8_GLO3 Marker 15,547,453 - 15,547,584 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_9_1_1192 Marker 7,248,700 - 7,248,858 soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_9_1_1192 Marker 17,393,242 - 17,393,990 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_9_1_1192 Marker 17,158,366 - 17,158,872 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm12 VuMucheroUCRiverside2009_9_1_1192 Marker 5,758,517 - 5,759,050 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0984 Marker 33,102,692 - 33,102,916 soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_3_1_0984 Marker 26,789,878 - 26,835,220 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 VuMucheroUCRiverside2009_3_1_0984 Marker 4,102,372 - 4,102,602 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_3_1_0984 Marker 19,112,839 - 19,113,084 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_6_1_0132 Marker 37,214,037 - 37,214,303 barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_6_1_0132 Marker 4,816,641 - 4,816,919 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm18 VuMucheroUCRiverside2009_6_1_0132 Marker 10,788,134 - 10,791,212 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 VuMucheroUCRiverside2009_6_1_0132 Marker 25,987,682 - 25,987,954 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_4_g128 Marker 16,666,261 - 16,666,446 barrel medic - Mt3.0 - MtChr3 PvMcCleanNDSU2007_4_g128 Marker 29,633,752 - 29,633,907 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 PvMcCleanNDSU2007_4_g128 Marker 10,636,401 - 10,637,385 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 PvMcCleanNDSU2007_4_g128 Marker 2,491,961 - 2,492,101 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_0021 Marker 26,801,029 - 26,801,250 barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_2_1_0021 Marker 27,417,949 - 27,418,188 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_2_1_0021 Marker 12,017,893 - 12,018,168 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_2_1_0021 Marker 52,579,336 - 52,581,385 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_1_R2005HaC Marker 12,299,929 - 12,300,156 soybean - GmJGI8x - Gm10 AhBurow2001_1_R2005HaC Marker 39,294,664 - 39,294,945 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm20 AhBurow2001_1_R2005HaC Marker 44,957,800 - 44,958,083 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr1 AhBurow2001_1_R2005HaC Marker 19,417,366 - 19,417,647 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_11_1_0562 Marker 21,712,861 - 21,713,277 barrel medic - Mt3.0 - MtChr7 VuMucheroUCRiverside2009_11_1_0562 Marker 9,591,414 - 9,591,866 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_11_1_0562 Marker 33,164,094 - 33,244,058 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_6_g1159 Marker 20,341,877 - 20,342,032 soybean - GmJGI8x - Gm09 PvMcCleanNDSU2007_6_g1159 Marker 351,563 - 351,874 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr7 PvMcCleanNDSU2007_6_g1159 Marker 4,206,135 - 4,206,248 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm15 PvMcCleanNDSU2007_6_g1159 Marker 8,509,014 - 8,509,512 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_8_g2264 Marker 15,561,249 - 15,561,425 soybean - GmJGI8x - Gm02 PvMcCleanNDSU2007_8_g2264 Marker 6,345,601 - 6,345,774 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr5 PvMcCleanNDSU2007_8_g2264 Marker 34,752,919 - 34,753,071 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 PvMcCleanNDSU2007_8_g2264 Marker 47,296,376 - 47,296,952 (cM) Automated name-based, Automated name-based View Maps