LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set lotus-LjKazusa200905
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LjChr4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
TOG
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: lotus - LjKazusa200905 [ View Map Set Info ]
Map Name: LjChr4
Map Start: 0 cM
Map Stop: 68,127,445 cM
Features by Type:
174 Marker
125 TOG
299 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 299.       of 12 | Next
lotus - LjKazusa200905 - LjChr4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
VuMucheroUCRiverside2009_3_1_0878 Marker 42,176,477 - 42,177,001 soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_3_1_0878 Marker 20,624,653 - 20,625,285 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0878 Marker 4,226,084 - 4,228,811 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0105 Marker 45,911,547 - 45,912,116 soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0105 Marker 3,416,943 - 3,417,506 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_3_1_0105 Marker 21,211,914 - 21,216,133 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_3_1_0105 Marker 31,620,598 - 31,621,161 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_11_1_0069 Marker 4,894,837 - 4,895,040 barrel medic - Mt3.0 - MtChr6 VuMucheroUCRiverside2009_11_1_0069 Marker 13,155,528 - 13,155,806 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_11_1_0069 Marker 36,114,644 - 36,117,320 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_11_1_0069 Marker 31,953,750 - 31,953,953 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0681 Marker 39,131,637 - 39,131,867 barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_3_1_0681 Marker 30,564,276 - 30,564,437 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_3_1_0681 Marker 526,200 - 528,188 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_0681 Marker 4,966,273 - 4,966,419 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0724 Marker 67,210,456 - 67,210,617 soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0724 Marker 39,238,614 - 39,238,898 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0724 Marker 3,267,846 - 3,269,470 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_3_1_0724 Marker 39,633,237 - 39,633,353 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0299 Marker 4,790,629 - 4,790,766 barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_3_1_0299 Marker 41,730,849 - 41,730,974 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0299 Marker 31,967,604 - 31,971,697 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0299 Marker 6,319,910 - 6,320,071 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_1_1_0731 Marker 68,002,472 - 68,002,666 soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_1_1_0731 Marker 43,120,473 - 43,120,733 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm15 VuMucheroUCRiverside2009_1_1_0731 Marker 1,251,234 - 1,253,680 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 VuMucheroUCRiverside2009_1_1_0731 Marker 29,630,750 - 29,630,956 (cM) Automated name-based, Automated name-based View Maps
MtYoungUMinn2006_4_MPP Marker 65,747,133 - 65,747,384 barrel medic - Mt3.0 - MtChr4 MtYoungUMinn2006_4_MPP Marker 40,570,317 - 40,570,571 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 MtYoungUMinn2006_4_MPP Marker 39,962,481 - 39,963,010 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 MtYoungUMinn2006_4_MPP Marker 2,530,530 - 2,530,694 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_7_1_0564 Marker 7,051,256 - 7,051,648 soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_7_1_0564 Marker 1,817,362 - 1,818,822 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm01 VuMucheroUCRiverside2009_7_1_0564 Marker 16,336,494 - 16,336,886 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0475 Marker 7,310,073 - 7,310,378 soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0475 Marker 9,726,294 - 9,726,500 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0475 Marker 35,569,954 - 35,575,470 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_3_1_0475 Marker 33,734,848 - 33,735,060 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1412 Marker 39,811,878 - 39,812,087 barrel medic - Mt3.0 - MtChr2 VuMucheroUCRiverside2009_3_1_1412 Marker 12,192,533 - 12,192,742 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_1412 Marker 4,685,515 - 4,685,751 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_1412 Marker 31,587,934 - 31,588,128 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_5_1_1419 Marker 47,273,148 - 47,273,420 barrel medic - Mt3.0 - MtChr5 VuMucheroUCRiverside2009_5_1_1419 Marker 31,969,056 - 31,969,340 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 VuMucheroUCRiverside2009_5_1_1419 Marker 3,924,413 - 3,924,682 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 VuMucheroUCRiverside2009_5_1_1419 Marker 45,852,446 - 45,875,556 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1195 Marker 62,555,738 - 62,555,986 soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_1195 Marker 41,309,445 - 41,312,514 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0447 Marker 67,717,280 - 67,717,471 barrel medic - Mt3.0 - MtChr5 VuMucheroUCRiverside2009_3_1_0447 Marker 24,076,759 - 24,076,971 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0447 Marker 3,675,346 - 3,675,958 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0447 Marker 38,819,329 - 38,819,508 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_9.1_R2514HbU Marker 4,353,349 - 4,353,558 soybean - GmJGI8x - Gm13 AhBurow2001_9.1_R2514HbU Marker 37,507,290 - 37,507,427 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 AhBurow2001_9.1_R2514HbU Marker 27,126,289 - 27,126,432 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm13 AhBurow2001_9.1_R2514HbU Marker 41,332,418 - 41,368,570 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_20_S1091EaB Marker 29,565,427 - 29,565,642 soybean - GmJGI8x - Gm05 AhBurow2001_20_S1091EaB Marker 2,141,131 - 2,141,674 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 AhBurow2001_20_S1091EaB Marker 10,312,929 - 10,313,129 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1396 Marker 55,961,133 - 55,961,216 barrel medic - Mt3.0 - MtChr6 VuMucheroUCRiverside2009_3_1_1396 Marker 17,280,336 - 17,280,632 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_1396 Marker 35,244,877 - 35,247,474 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_1396 Marker 9,387,740 - 9,387,967 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1072 Marker 56,294,545 - 56,294,685 barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_3_1_1072 Marker 35,683,397 - 35,683,531 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_1072 Marker 12,225,444 - 12,225,611 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_1072 Marker 37,453,514 - 37,456,923 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_0031 Marker 60,907,509 - 60,907,640 soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_0031 Marker 687,411 - 689,125 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr4 VuMucheroUCRiverside2009_3_1_0031 Marker 37,606,803 - 37,606,934 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm05 VuMucheroUCRiverside2009_3_1_0031 Marker 41,833,782 - 41,833,919 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_4_g755 Marker 67,261,232 - 67,261,408 soybean - GmJGI8x - Gm07 PvMcCleanNDSU2007_4_g755 Marker 8,637,785 - 8,638,009 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr6 PvMcCleanNDSU2007_4_g755 Marker 5,183,785 - 5,184,000 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm09 PvMcCleanNDSU2007_4_g755 Marker 38,241,618 - 38,242,065 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_18_S1108HaB Marker 32,231,047 - 32,231,166 soybean - GmJGI8x - Gm05 AhBurow2001_18_S1108HaB Marker 527,548 - 527,844 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 AhBurow2001_18_S1108HaB Marker 8,264,035 - 8,264,154 (cM) Automated name-based, Automated name-based View Maps
PvMcCleanNDSU2007_8_g1588 Marker 60,797,195 - 60,797,449 soybean - GmJGI8x - Gm08 PvMcCleanNDSU2007_8_g1588 Marker 36,775,224 - 36,775,451 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr7 PvMcCleanNDSU2007_8_g1588 Marker 845,804 - 846,055 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 PvMcCleanNDSU2007_8_g1588 Marker 46,591,545 - 46,591,879 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1144 Marker 1,849,139 - 1,849,660 soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_3_1_1144 Marker 44,129,045 - 44,130,067 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm17 VuMucheroUCRiverside2009_3_1_1144 Marker 598,679 - 599,828 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr8 VuMucheroUCRiverside2009_3_1_1144 Marker 36,719,276 - 36,719,797 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_3_1_1065 Marker 48,154,259 - 48,154,390 soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_3_1_1065 Marker 43,211,558 - 43,211,704 (cM) Automated name-based, Automated name-based View Maps
barrel medic - Mt3.0 - MtChr2 VuMucheroUCRiverside2009_3_1_1065 Marker 9,116,164 - 9,116,292 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_3_1_1065 Marker 44,343,723 - 44,349,924 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0122 Marker 52,240,411 - 52,240,695 barrel medic - Mt3.0 - MtChr3 VuMucheroUCRiverside2009_4_1_0122 Marker 25,994,359 - 25,994,613 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_4_1_0122 Marker 16,727,727 - 16,727,789 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm11 VuMucheroUCRiverside2009_4_1_0122 Marker 38,084,971 - 38,086,346 (cM) Automated name-based, Automated name-based View Maps