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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set alfalfa-MsSledge2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: alfalfa - MsSledge2005 [ View Map Set Info ]
Map Name: 8
Map Start: 0 cM
Map Stop: 73.87 cM
Features by Type:
45 SSR
45 Total

Map Features

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Items 1 to 25 of 45.       of 2 | Next
alfalfa - MsSledge2005 - 8
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BF61 SSR 0 No other positions
AW325 SSR 5.31 No other positions
Mt1F08(2) SSR 6.69 No other positions
BE140 SSR 7.29 No other positions
MtBA24D05R1 SSR 11.88 No other positions
AW186 SSR 11.88 No other positions
MTIC103 SSR 13.27 barrel medic - MtYoungUMinn2006 - 8 MTIC103 SSR 19.1 (cM) Automated name-based, Automated name-based View Maps
alfalfa - MsJulier2003 - 8 MTIC103 SSR 0 (cM) Automated name-based, Automated name-based View Maps
AW255 SSR 17.35 No other positions
AL82 SSR 24.06 No other positions
Mt1G03 SSR 29.54 No other positions
MTIC135 SSR 30.68 No other positions
BF97 SSR 30.7 No other positions
BF85 SSR 32.4 No other positions
BG253 SSR 39.2 No other positions
BG268 SSR 39.27 No other positions
Mt1A04 SSR 42.58 No other positions
AL64 SSR 43.42 No other positions
BG186 SSR 43.78 No other positions
Mt1B06(2) SSR 46.67 No other positions
MTBA49D07F1 SSR 48.08 No other positions
MTIC188 SSR 49.16 No other positions
AL47b SSR 49.38 No other positions
BG150 SSR 51.73 No other positions
AFca16 SSR 53.33 No other positions
BI79 SSR 55.96 No other positions