LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set barrel medic-Mt3.0
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps AC235488.1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: barrel medic - Mt3.0 [ View Map Set Info ]
Map Name: AC235488.1
Map Start: 0 cM
Map Stop: 165,968 cM
Features by Type:
6 Marker
6 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
barrel medic - Mt3.0 - AC235488.1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
VuMucheroUCRiverside2009_3_1_1349 Marker 165,777 - 165,968 lotus - LjKazusa200905 - LjChr2 VuMucheroUCRiverside2009_3_1_1349 Marker 41,367,334 - 41,367,519 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_1349 Marker 40,224,855 - 40,225,112 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm08 VuMucheroUCRiverside2009_3_1_1349 Marker 8,658,329 - 8,664,762 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_0113 Marker 125,898 - 126,125 soybean - GmJGI8x - Gm13 VuMucheroUCRiverside2009_2_1_0113 Marker 38,657,703 - 38,659,449 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr1 VuMucheroUCRiverside2009_2_1_0113 Marker 79,414,679 - 79,414,897 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm02 VuMucheroUCRiverside2009_2_1_0113 Marker 27,945,921 - 27,946,190 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_4_1_0157 Marker 31,614 - 31,883 lotus - LjKazusa200905 - LjChr1 VuMucheroUCRiverside2009_4_1_0157 Marker 79,288,351 - 79,288,611 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_4_1_0157 Marker 30,227,422 - 30,227,496 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 VuMucheroUCRiverside2009_4_1_0157 Marker 43,503,917 - 43,504,782 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_14_R2046EaB Marker 109,507 - 109,671 lotus - LjKazusa200905 - LjChr1 AhBurow2001_14_R2046EaB Marker 79,303,319 - 79,303,480 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm19 AhBurow2001_14_R2046EaB Marker 45,976,355 - 45,976,660 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm03 AhBurow2001_14_R2046EaB Marker 43,488,489 - 43,488,677 (cM) Automated name-based, Automated name-based View Maps
AhBurow2001_4_R2046EbD Marker 109,507 - 109,671 soybean - GmJGI8x - Gm03 AhBurow2001_4_R2046EbD Marker 43,488,489 - 43,488,677 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr1 AhBurow2001_4_R2046EbD Marker 79,303,319 - 79,303,480 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm19 AhBurow2001_4_R2046EbD Marker 45,976,355 - 45,976,660 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_10_1_0111 Marker 36,226 - 36,489 lotus - LjKazusa200905 - LjChr3 VuMucheroUCRiverside2009_10_1_0111 Marker 61,607,544 - 61,607,813 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm07 VuMucheroUCRiverside2009_10_1_0111 Marker 3,597,451 - 3,597,714 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_10_1_0111 Marker 1,035,515 - 1,037,261 (cM) Automated name-based, Automated name-based View Maps