LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set barrel medic-Mt3.0
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps AC235664.1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: barrel medic - Mt3.0 [ View Map Set Info ]
Map Name: AC235664.1
Map Start: 0 cM
Map Stop: 26,247 cM
Features by Type:
5 Marker
5 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 5 of 5.
barrel medic - Mt3.0 - AC235664.1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AhBurow2001_1_R2545EcC Marker 21,535 - 21,705 No other positions
AhBurow2001_11_R2545EaB Marker 21,535 - 21,705 No other positions
VuMucheroUCRiverside2009_2_1_0144 Marker 5,429 - 5,605 soybean - GmJGI8x - Gm20 VuMucheroUCRiverside2009_2_1_0144 Marker 41,970,321 - 41,976,292 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_2_1_0144 Marker 42,342,025 - 42,342,207 (cM) Automated name-based, Automated name-based View Maps
lotus - LjKazusa200905 - LjChr5 VuMucheroUCRiverside2009_2_1_0144 Marker 41,324,521 - 41,324,703 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_0674 Marker 26,002 - 26,247 lotus - LjKazusa200905 - LjChr5 VuMucheroUCRiverside2009_2_1_0674 Marker 50,642,830 - 50,643,414 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm16 VuMucheroUCRiverside2009_2_1_0674 Marker 31,827,856 - 31,828,410 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_2_1_0674 Marker 44,788,095 - 44,798,283 (cM) Automated name-based, Automated name-based View Maps
VuMucheroUCRiverside2009_2_1_1033 Marker 21,521 - 21,712 lotus - LjKazusa200905 - LjChr5 VuMucheroUCRiverside2009_2_1_1033 Marker 41,342,798 - 41,342,941 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm10 VuMucheroUCRiverside2009_2_1_1033 Marker 42,358,640 - 42,358,786 (cM) Automated name-based, Automated name-based View Maps
soybean - GmJGI8x - Gm20 VuMucheroUCRiverside2009_2_1_1033 Marker 41,956,044 - 41,956,887 (cM) Automated name-based, Automated name-based View Maps