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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set barrel medic-MtYoungUMinn2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
Marker
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: barrel medic - MtYoungUMinn2006 [ View Map Set Info ]
Map Name: 4
Map Start: -3.5 cM
Map Stop: 64.1 cM
Features by Type:
30 CAPS
2 Marker
3 SNP
115 SSR
150 Total

Map Features

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Items 1 to 25 of 150.       of 6 | Next
barrel medic - MtYoungUMinn2006 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
h2_23d2c SSR 57.9 No other positions
h2_9h8a SSR 58 No other positions
003C07 SSR 55.4 No other positions
h2_11o4I SSR 42.8 No other positions
003B06 SSR 61.1 No other positions
DK381L CAPS 33.2 barrel medic - MtYoungUMinn2006 - 1 DK377R CAPS 60.4 (cM) Automated name-based View Maps
barrel medic - MtYoungUMinn2006 - 3 DK382L CAPS 5.2 (cM) Automated name-based View Maps
002A12 SSR 55.4 No other positions
h2_8d13a SSR 3.9 No other positions
h2_173c10a SSR 52.6 No other positions
43I21L CAPS 10.3 No other positions
NUM1 CAPS 52.6 No other positions
005D04 SSR 48.1 No other positions
h2_6e22a SSR -3.2 No other positions
UNK3 CAPS 11.8 No other positions
005G11 SSR 61.1 No other positions
DK363L Marker 11.8 No other positions
PCT CAPS 48.1 No other positions
h2_39k21c SSR 12 No other positions
005B01 SSR 2.3 No other positions
DENP Marker 59 No other positions
004B10 SSR 59.7 No other positions
005A05 SSR 61.1 No other positions
25A23L CAPS 55.4 No other positions
AW208206 SSR 36.6 No other positions
004A07 SSR 10.3 No other positions