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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set common bean-PvConsensus_GaleanoFernandez2011_a
(Reference Set)
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Correspondences
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Maps Pv09
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL_development
QTL_organic
QTL_root
QTL_seed
QTL_yield
RAPD
SNP
SSR
STS
Other
 
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvConsensus_GaleanoFernandez2011_a [ View Map Set Info ]
Map Name: Pv09
Map Start: 0 cM
Map Stop: 142.48 cM
Features by Type:
2 QTL_development
1 QTL_organic
11 QTL_root
3 QTL_seed
3 QTL_yield
3 RAPD
35 SNP
26 SSR
3 STS
87 Total

Map Features

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common bean - PvConsensus_GaleanoFernandez2011_a - Pv09
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SSR-TC35775 SSR 31.63 No other positions
g2510 SNP 36.27 No other positions
g2516 SNP 40.69 No other positions
g1206 SNP 42.65 No other positions
Seed yield 2-9 QTL_yield 42.9 - 67.2 No other positions
g2613 SNP 45.32 No other positions
Seed weight 1-24 QTL_seed 46.2 - 62 No other positions
Root length, specific 1-5 QTL_root 46.6 - 51.5 No other positions
BMb264 SSR 47 No other positions
g708 SNP 47.78 No other positions
Root density 1-3 QTL_root 48.7 - 50.6 No other positions
Root density 1-4 QTL_root 48.7 - 51.8 No other positions
Bng228 STS 48.71 No other positions
Bng24 STS 48.74 No other positions
PVBR60 SSR 48.74 No other positions
Bng102 STS 49.2 No other positions
g2272 SNP 51.9 No other positions
g792 SNP 54.23 No other positions
Leg189 SNP 56.1 No other positions
BSNP92 SNP 56.81 No other positions
g732 SNP 58.77 No other positions
g1107 SNP 61.07 No other positions
ME1 SSR 61.78 No other positions
g993 SNP 63.12 No other positions
Seed weight 1-23 QTL_seed 63.3 - 77.8 No other positions