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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set common bean-PvConsensus_GaleanoFernandez2011_a
(Reference Set)
Min.
Correspondences
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Maps Pv09
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_development
QTL_organic
QTL_root
QTL_seed
QTL_yield
RAPD
SNP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvConsensus_GaleanoFernandez2011_a [ View Map Set Info ]
Map Name: Pv09
Map Start: 0 cM
Map Stop: 142.48 cM
Features by Type:
2 QTL_development
1 QTL_organic
11 QTL_root
3 QTL_seed
3 QTL_yield
3 RAPD
35 SNP
26 SSR
3 STS
87 Total

Map Features

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Items 1 to 25 of 87.       of 4 | Next
common bean - PvConsensus_GaleanoFernandez2011_a - Pv09
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BMb1519 SSR 0 No other positions
g2209 SNP 4.19 No other positions
First flower, bean 2-5 QTL_development 5.9 - 25.7 No other positions
g860 SNP 6.24 No other positions
g385 SNP 6.24 No other positions
g2398 SNP 6.24 No other positions
g195 SNP 6.69 No other positions
g2335 SNP 6.69 No other positions
BMb563 SSR 9.9 No other positions
O2001 RAPD 18.71 No other positions
U1801 RAPD 19.05 No other positions
BM114 SSR 20.69 No other positions
g1379 SNP 20.98 No other positions
BMb143 SSR 21.36 No other positions
BMb493 SSR 21.36 No other positions
g634 SNP 21.51 No other positions
BM141 SSR 23 No other positions
N201 RAPD 23.26 No other positions
Seed yield 2-8 QTL_yield 26.2 - 41.5 No other positions
First flower, bean 2-7 QTL_development 26.2 - 41.8 No other positions
BM202 SSR 27.23 common bean - PvMcCleanNDSU2007 - 9 BM202 SSR 58 (cM) Automated name-based, Automated name-based View Maps
BMb598 SSR 27.92 No other positions
BMb1119 SSR 30.57 No other positions
BMb737 SSR 30.57 No other positions
g1126 SNP 31.63 No other positions