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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-PvMcCleanNDSU2007
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
CAPS
dCAPS
RAPD
RFLP
size-indel
SNAP
SNP
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - PvMcCleanNDSU2007 [ View Map Set Info ]
Map Name: 6
Map Start: 0 cM
Map Stop: 130 cM
Features by Type:
20 CAPS
4 RAPD
5 RFLP
2 SNAP
1 SNP
3 SSR
1 STS
7 dCAPS
2 size-indel
45 Total

Map Features

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Items 1 to 25 of 45.       of 2 | Next
common bean - PvMcCleanNDSU2007 - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Bng104 RFLP 0 soybean - GmComposite2003 - H Bng104_1 RFLP 71.73 (cM) Automated name-based, Automated name-based View Maps
common bean - BAT93_x_JALOEEP558_b - B06 Bng104 RFLP 0 (cM) Automated name-based, Automated name-based View Maps
g1957 CAPS 0 - 4 No other positions
g1174 CAPS 4 No other positions
g2480 CAPS 4 No other positions
g2383 CAPS 4 - 11 No other positions
g1190 CAPS 11 No other positions
g1757 CAPS 13 No other positions
g1488 CAPS 13 - 19 No other positions
g1837 CAPS 13 - 19 No other positions
g1280 SNAP 19 No other positions
g1818 dCAPS 27 No other positions
g2208 CAPS 29 No other positions
g2439 dCAPS 33 No other positions
g1998 dCAPS 33 - 37 No other positions
Bng94 RFLP 37 No other positions
g2192 CAPS 38 No other positions
P2062 RFLP 43 common bean - BAT93_x_JALOEEP558_b - B06 P2062 RFLP 41.6 (cM) Automated name-based, Automated name-based View Maps
DROF7a RAPD 43 - 52 No other positions
g861 dCAPS 52 No other positions
g2435 CAPS 64 No other positions
g1249 CAPS 64 - 69 No other positions
g1159 CAPS 69 No other positions
g1748 dCAPS 74 No other positions
g1852 CAPS 82 No other positions
g1361 dCAPS 85 No other positions