LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-Stampede_x_RedHawk_F2_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Pv01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - Stampede_x_RedHawk_F2_a [ View Map Set Info ]
Map Name: Pv01
Map Start: 0 cM
Map Stop: 84.034 cM
Features by Type:
386 SNP
386 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 386.       of 16 | Next
common bean - Stampede_x_RedHawk_F2_a - Pv01
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ss715647342 SNP 4.386 No other positions
ss715639516 SNP 5.009 No other positions
ss715639517 SNP 5.009 No other positions
ss715639518 SNP 5.009 No other positions
ss715639284 SNP 7.695 No other positions
ss715648855 SNP 10.788 No other positions
ss715647678 SNP 11.632 No other positions
ss715647675 SNP 11.632 No other positions
ss715647676 SNP 11.841 No other positions
ss715648030 SNP 12.172 No other positions
ss715645089 SNP 12.397 No other positions
ss715648027 SNP 12.397 No other positions
ss715648029 SNP 12.397 No other positions
ss715649655 SNP 12.901 No other positions
ss715649659 SNP 13.309 No other positions
ss715648192 SNP 13.728 No other positions
ss715648193 SNP 13.728 No other positions
ss715648196 SNP 14.754 No other positions
ss715648187 SNP 14.96 No other positions
ss715648189 SNP 15.168 No other positions
ss715648190 SNP 15.332 No other positions
ss715648191 SNP 15.332 No other positions
ss715644931 SNP 15.502 No other positions
ss715640553 SNP 15.502 No other positions
ss715645594 SNP 18.878 No other positions