LIS - Legume Information System | CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial  


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set common bean-Stampede_x_RedHawk_F2_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Pv02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: common bean - Stampede_x_RedHawk_F2_a [ View Map Set Info ]
Map Name: Pv02
Map Start: 0 cM
Map Stop: 127.601 cM
Features by Type:
316 SNP
316 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 316.       of 13 | Next
common bean - Stampede_x_RedHawk_F2_a - Pv02
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ss715649479 SNP 0 No other positions
ss715649478 SNP 0.4 No other positions
ss715641034 SNP 0.4 No other positions
ss715641033 SNP 1.381 No other positions
ss715641032 SNP 1.976 No other positions
ss715640457 SNP 1.976 No other positions
ss715640456 SNP 2.2 No other positions
ss715646674 SNP 5.22 No other positions
ss715639371 SNP 8 No other positions
ss715639372 SNP 7.951 No other positions
ss715640279 SNP 12.663 No other positions
ss715640360 SNP 17.374 No other positions
ss715639436 SNP 17.584 No other positions
ss715646980 SNP 20.719 No other positions
ss715639434 SNP 22.302 No other positions
ss715639435 SNP 25.126 No other positions
ss715647233 SNP 25.126 No other positions
ss715639495 SNP 26.743 No other positions
ss715646371 SNP 33.257 No other positions
ss715639502 SNP 38.209 No other positions
ss715647299 SNP 38.9 No other positions
ss715647302 SNP 39.93 No other positions
ss715647305 SNP 40.12 No other positions
ss715647668 SNP 40.898 No other positions
ss715647663 SNP 42.308 No other positions