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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-TT_AhConsensus_GautamiPandey2012_a
(Reference Set)
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Correspondences
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Maps LG_AhXVII
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_AhConsensus_GautamiPandey2012_a [ View Map Set Info ]
Map Name: LG_AhXVII
Map Start: 0 cM
Map Stop: 44.1 cM
Features by Type:
7 SSR
7 Total

Map Features

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Items 1 to 7 of 7.
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXVII
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1418 SSR 0 peanut - TT_TAG24_x_ICGV86031_a - LG_AhXVII GM1418 SSR 0 (cM) Automated name-based, Automated name-based View Maps
IPAHM105 SSR 22.5 peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 IPAHM105.A04 SSR 45.64 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXVII IPAHM105 SSR 11.066 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG06 IPAHM105 SSR 46.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 IPAHM105.B04 SSR 113.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXVII IPAHM105 SSR 22.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVII IPAHM105 SSR 55.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG9 IPAHM105 SSR 47.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 IPAHM105 SSR 56.777 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 IPAHM105 SSR 53.5 (cM) Automated name-based, Automated name-based View Maps
GM1959 SSR 24.6 peanut - TT_TG26_x_GPBD4_a - AhXVII GM1959 SSR 67.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 GM1959 SSR 101.34 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXVII GM1959 SSR 21.438 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVII GM1959 SSR 47.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG13 GM1959 SSR 28.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.duranensis_a - A04 GM1959 SSR 59.305 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B04 GM1959 SSR 64.853 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG01 GM1959 SSR 0 (cM) Automated name-based, Automated name-based View Maps
IPAHM108A SSR 26.8 peanut - TT_TAG24_x_ICGV86031_a - LG_AhXVII IPAHM108A SSR 26.8 (cM) Automated name-based, Automated name-based View Maps
IPAHM97 SSR 32.7 peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 IPAHM97 SSR 66.68 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG01 IPAHM97 SSR 8.1 (cM) Automated name-based, Automated name-based View Maps
S11 SSR 34.3 peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 S11 SSR 47.01 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhXVII S11 SSR 34.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG01 S11 SSR 9.7 (cM) Automated name-based, Automated name-based View Maps
GM1445 SSR 44.1 peanut - AA_A.duranensis_x_A.duranensis_a - A04 GM1445 SSR 39.708 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B04 GM1445 SSR 56.563 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVII GM1445 SSR 107.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG13 GM1445 SSR 49.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVII GM1445 SSR 56.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXVII GM1445 SSR 29.907 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG01 GM1445 SSR 19.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 GM1445 SSR 44.8 (cM) Automated name-based, Automated name-based View Maps