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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Fleur11_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_pod
QTL_seed
QTL_stress-tolerance
QTL_whole-plant
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Fleur11_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: A07
Map Start: 0 cM
Map Stop: 107.1 cM
Features by Type:
7 QTL_pod
8 QTL_seed
3 QTL_stress-tolerance
2 QTL_whole-plant
18 SSR
38 Total

Map Features

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Items 1 to 25 of 38.       of 2 | Next
peanut - TT_Fleur11_x_A.ipaensis-A.duranensis_a - A07
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RN13D04_A SSR 0 peanut - TT_VG9514_x_TAG24_a - B07 RN13D04_a SSR 154.1 (cM) Automated name-based, Automated name-based View Maps
Seed length 2-1 QTL_seed 0 - 5 No other positions
Pod length 2-1 QTL_pod 0 - 7 No other positions
Seed length 2-2 QTL_seed 0 - 9 No other positions
Seed weight 2-1 QTL_seed 0 - 10 common bean - PvConsensus_GaleanoFernandez2011_a - Pv03 Seed weight 2-1 QTL_seed 97.4 - 117.6 (cM) Automated name-based, Automated name-based View Maps
Drought tolerance 1-3 QTL_stress-tolerance 0 - 11 No other positions
Seed weight 2-2 QTL_seed 0 - 12 common bean - PvConsensus_GaleanoFernandez2011_a - Pv04 Seed weight 2-2 QTL_seed 134.1 - 141.6 (cM) Automated name-based, Automated name-based View Maps
Drought tolerance 1-8 QTL_stress-tolerance 0 - 13 No other positions
Drought tolerance 1-10 QTL_stress-tolerance 0 - 21 No other positions
Pod constriction 1-2 QTL_pod 0 - 107.1 No other positions
Seed width 1-1 QTL_seed 2 - 10 common bean - PvConsensus_GaleanoFernandez2011_a - Pv03 Seed width 1-1 QTL_seed 101.4 - 109.3 (cM) Automated name-based, Automated name-based View Maps
Seed width 1-2 QTL_seed 2 - 11 No other positions
Pod width 1-2 QTL_pod 2 - 12 No other positions
Pod beak 1-4 QTL_pod 2 - 107 No other positions
Pod width 1-1 QTL_pod 2 - 107.1 No other positions
Seq2E06_A SSR 3.7 No other positions
Seq5D05_A SSR 12.6 No other positions
TC23E04_A SSR 14.9 No other positions
TC22D09_A SSR 18.3 No other positions
PM042_A1 SSR 21.7 No other positions
Stature 1-2 QTL_whole-plant 33 - 58 No other positions
Plant height 1-2 QTL_whole-plant 35 - 63 common bean - PvConsensus_GaleanoFernandez2011_a - Pv06 Plant height 1-2 QTL_whole-plant 59.9 - 111.9 (cM) Automated name-based, Automated name-based View Maps
Seq14D01_A SSR 42.1 No other positions
Ah-594_A2 SSR 46.7 No other positions
IPAHM290_A SSR 49 No other positions