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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Fleur11_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A08
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_pod
QTL_seed
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Fleur11_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: A08
Map Start: 0 cM
Map Stop: 97.3 cM
Features by Type:
4 QTL_pod
1 QTL_seed
16 SSR
21 Total

Map Features

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Items 1 to 21 of 21.
peanut - TT_Fleur11_x_A.ipaensis-A.duranensis_a - A08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC9B08_A SSR 0 No other positions
RM7E04_A SSR 4.7 No other positions
TC3B05_A SSR 7 No other positions
Seed length 2-3 QTL_seed 23.7 - 96.1 No other positions
TC7A02_A SSR 28.8 No other positions
Pod beak 1-5 QTL_pod 29.7 - 62.7 No other positions
Pod width 1-3 QTL_pod 30.7 - 62.7 No other positions
TC3B04_A SSR 32.2 No other positions
seq3A08_A SSR 39.1 No other positions
seq2G03_A SSR 41.4 No other positions
RN22A12_A SSR 41.4 No other positions
RM5G08_A SSR 59.2 No other positions
RN18H05_A SSR 64.9 No other positions
Ad90F2_A SSR 70.6 No other positions
TC9F10_A SSR 70.6 No other positions
TC22C01_A SSR 76.3 No other positions
Pod constriction 1-4 QTL_pod 81.7 - 96.1 No other positions
Pod length 2-2 QTL_pod 81.7 - 96.1 No other positions
TC1E05_A SSR 90.3 No other positions
IPAHM229_A SSR 96.1 No other positions
IPAHM540_A SSR 97.3 No other positions