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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_ICGS76_x_CSMG84-1_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_ICGS76_x_CSMG84-1_a [ View Map Set Info ]
Map Name: LG02
Map Start: 0 cM
Map Stop: 63.5 cM
Features by Type:
5 SSR
5 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 5 of 5.
peanut - TT_ICGS76_x_CSMG84-1_a - LG02
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RNoX681 SSR 0 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhII RNoX681 SSR 0 (cM) Automated name-based, Automated name-based View Maps
IPAHM596 SSR 24.3 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhII IPAHM596 SSR 24.3 (cM) Automated name-based, Automated name-based View Maps
IPAHM254 SSR 45.6 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhII IPAHM254 SSR 47.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A02 IPAHM254 SSR 35.55 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG02 IPAHM254 SSR 3.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A02 IPAHM254 SSR 42.38 (cM) Automated name-based, Automated name-based View Maps
PM499 SSR 48.6 peanut - TT_TG26_x_GPBD4_a - AhII PM499 SSR 15.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B02 PM499 SSR 63.55 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG11 PM499 SSR 7.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 PM499 SSR 135.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhII PM499 SSR 20.444 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhII PM499 SSR 41.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhII PM499 SSR 48.6 (cM) Automated name-based, Automated name-based View Maps
TC1E01 SSR 63.5 peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 TC1E01.B02 SSR 56.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhII TC1E01 SSR 63.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_VG9514_x_TAG24_a - A02 TC1E01 SSR 44.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhII TC1E01 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhII TC1E01 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A02 TC1E01.A02 SSR 86.94 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB02 TC1E01 SSR 21.597 (cM) Automated name-based, Automated name-based View Maps