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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-TT_ICGS76_x_CSMG84-1_a
(Reference Set)
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Correspondences
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Maps LG05
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Highlight Features:
Feature Types:
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Correspondence		 Always Display
SSR
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Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_ICGS76_x_CSMG84-1_a [ View Map Set Info ]
Map Name: LG05
Map Start: 0 cM
Map Stop: 238 cM
Features by Type:
10 SSR
10 Total

Map Features

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Items 1 to 10 of 10.
peanut - TT_ICGS76_x_CSMG84-1_a - LG05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM1571 SSR 0 peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 GM1571 SSR 108.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXVII GM1571 SSR 14.629 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVII GM1571 SSR 62.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV GM1571 SSR 229.1 (cM) Automated name-based, Automated name-based View Maps
GM1577 SSR 44.4 peanut - AA_A.duranensis_x_A.duranensis_a - A05 GM1577 SSR 53.778 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG19 GM1577 SSR 23.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 GM1577 SSR 8.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 GM1577 SSR 53.751 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 GM1577 SSR 82.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV GM1577 SSR 184.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhV GM1577 SSR 11.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhV GM1577 SSR 43.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhV GM1577 SSR 10.592 (cM) Automated name-based, Automated name-based View Maps
IPAHM356 SSR 90.5 peanut - TT_TG26_x_GPBD4_a - AhV IPAHM356 SSR 6.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhV IPAHM356 SSR 8.239 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV IPAHM356 SSR 176 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 IPAHM356 SSR 71.55 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 IPAHM356 SSR 59.229 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 IPAHM356 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhV IPAHM356 SSR 27 (cM) Automated name-based, Automated name-based View Maps
TC6E01 SSR 91.9 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV TC6E01 SSR 174.6 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A05 TC6E01 SSR 100.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 TC6E01 SSR 9.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhV TC6E01 SSR 31.343 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB05 TC6E01 SSR 11.878 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 TC6E01 SSR 53.65 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA05 TC6E01 SSR 24.142 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A05 TC6E01 SSR 95.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhV TC6E01 SSR 16.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhV TC6E01 SSR 96.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B05 TC6E01.B05 SSR 33.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhV TC6E01 SSR 81.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 TC6E01.A05 SSR 164.23 (cM) Automated name-based, Automated name-based View Maps
TC3A12 SSR 106.7 peanut - TT_TAG24_x_ICGV86031_a - LG_AhV TC3A12 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhV TC3A12 SSR 17.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhV TC3A12 SSR 55.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhV TC3A12 SSR 16.046 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV TC3A12 SSR 134.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 TC3A12 SSR 5.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 TC3A12 SSR 65.195 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A05 TC3A12 SSR 110 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG08 Ah1TC3A12 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 TC3A12 SSR 91.73 (cM) Automated name-based, Automated name-based View Maps
TC2D08 SSR 145.8 peanut - TT_AhConsensus_GautamiFonceka2012_a - B09 TC2D08.B09 SSR 22.34 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhV TC2D08 SSR 9.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 TC2D08.A05 SSR 150.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhIX TC2D08 SSR 14.619 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhIX TC2D08 SSR 12.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV TC2D08 SSR 144.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhIX TC2D08 SSR 31.8 (cM) Automated name-based, Automated name-based View Maps
Ah4-04 SSR 178.4 peanut - TT_VG9514_x_TAG24_a - A03 Ah4-04 SSR 44.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV Ah4-04 SSR 111.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A03 Ah4-04 SSR 178.97 (cM) Automated name-based, Automated name-based View Maps
pPGSSeq17F06 SSR 211 peanut - TT_AhComposite_SujayGowda2012_a - AhXVII pPGSseq17F06 SSR 26.258 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG06 pPGSSeq17F06 SSR 2.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV pPGSSeq17F06 SSR 79.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B04 Seq17F06 SSR 73.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG15 pPGSSeq17F06 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVII pPGSseq17F06 SSR 116.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB04 Seq17F06 SSR 16.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 seq17F06 SSR 99.54 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVII pPGSseq17F06 SSR 74.7 (cM) Automated name-based, Automated name-based View Maps
gi-832 SSR 219 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV gi-832 SSR 73.25 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A04 gi-832 SSR 32 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG15 gi-832 SSR 3.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A04 gi-832 SSR 179.8 (cM) Automated name-based, Automated name-based View Maps
TC11H06 SSR 238 peanut - TT_AhComposite_SujayGowda2012_a - AhXVII TC11H06 SSR 37.62 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B04 TC11H06 SSR 43.218 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG15 TC11H06 SSR 42.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXVII TC11H06 SSR 93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B04 TC11H06 SSR 37.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV TC11H06 SSR 44.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhXVII TC11H06 SSR 128.4 (cM) Automated name-based, Automated name-based View Maps