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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_ICGS76_x_CSMG84-1_a
(Reference Set)
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Correspondences
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Maps LG06
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_ICGS76_x_CSMG84-1_a [ View Map Set Info ]
Map Name: LG06
Map Start: 0 cM
Map Stop: 79.9 cM
Features by Type:
8 SSR
8 Total

Map Features

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Items 1 to 8 of 8.
peanut - TT_ICGS76_x_CSMG84-1_a - LG06
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC1A02 SSR 0 peanut - BB_A.ipaensis_x_A.magna_a - BB06 TC1A02 SSR 19.836 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC1A02 SSR 39.4 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A06 TC1A02 SSR 86.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC1A02 SSR 31.544 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B06 TC1A02 SSR 55.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC1A02 SSR 39.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC1A02.B06 SSR 42.22 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC1A02 SSR 54.507 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC1A02.A06 SSR 131.33 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC1A02 SSR 74.3 (cM) Automated name-based, Automated name-based View Maps
RN34H10 SSR 0.3 peanut - TT_VG9514_x_TAG24_a - A06 RN34H10 SSR 57.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 RN34H10 SSR 134.53 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI RN34H10 SSR 42.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI RN34H10 SSR 42.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB05 RN34H10 SSR 5.191 (cM) Automated name-based, Automated name-based View Maps
TC11A04 SSR 0.3 peanut - AA_A.duranensis_x_A.stenosperma_a - A06 TC11A04 SSR 86.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG01 Ah2TC11A04 SSR 17.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC11A04 SSR 62.3 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC11A04 SSR 86.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC11A04.B06 SSR 45.91 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX TC11A04 SSR 31.85 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 TC11A04 SSR 26.458 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX TC11A04 SSR 57.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah2TC11A04 SSR 24.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC11A04 SSR 64.144 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC11A04 SSR 36.977 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC11A04 SSR 74.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC11A04 SSR 62.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC11A04.A06 SSR 148.59 (cM) Automated name-based, Automated name-based View Maps
IPAHM509 SSR 3.1 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI IPAHM509 SSR 77.55 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 IPAHM509 SSR 163.69 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI IPAHM509 SSR 89.7 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 IPAHM509 SSR 70.708 (cM) Automated name-based, Automated name-based View Maps
TC7C06 SSR 3.1 peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI TC7C06 SSR 93.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 TC7C06 SSR 26.031 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 TC7C06 SSR 167.29 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVI TC7C06 SSR 33.666 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06 TC7C06 SSR 57.666 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah2TC7C06 SSR 35.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVI TC7C06 SSR 84.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC7C06 SSR 75.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVI TC7C06 SSR 26.5 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI TC7C06 SSR 81.15 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC7C06 SSR 22.745 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A06 TC7C06 SSR 94.5 (cM) Automated name-based, Automated name-based View Maps
Ah4-101 SSR 26.7 peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 Ah4-101.A06 SSR 207.89 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI Ah4-101 SSR 104.75 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 Ah4-101.B08 SSR 57.67 (cM) Automated name-based, Automated name-based View Maps
GM2536 SSR 36.3 peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 GM2536.B08 SSR 120.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhVIII GM2536 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhVIII GM2536 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhVIII GM2536 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI GM2536 SSR 114.35 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 GM2536.A06 SSR 215.9 (cM) Automated name-based, Automated name-based View Maps
IPAHM689 SSR 79.9 peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 IPAHM689 SSR 21.724 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 IPAHM689.A06 SSR 260.19 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B10 IPAHM689.B10 SSR 47.4 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A02 IPAHM689 SSR 79.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG06 IPAHM689 SSR 10.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVI IPAHM689 SSR 157.95 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVI IPAHM689 SSR 35.7 (cM) Automated name-based, Automated name-based View Maps