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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps TA04
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TA04
Map Start: 0 cM
Map Stop: 103.489 cM
Features by Type:
99 SSR
6 transposon
105 Total

Map Features

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Items 1 to 25 of 105.       of 5 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA04
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHGS2793_t1 SSR 0 No other positions
AHGS1849 SSR 1.701 peanut - AA_A.duranensis_x_A.stenosperma_b - AA04 AHGS1849 SSR 3.436 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHGS1849 SSR 6.669 (cM) Automated name-based, Automated name-based View Maps
TC21A09 SSR 2.269 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 TC21A09 SSR 6.162 (cM) Automated name-based, Automated name-based View Maps
AHGS1432_t1 SSR 3.893 No other positions
AHGS1955 SSR 4.379 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHGS1955 SSR 3.619 (cM) Automated name-based, Automated name-based View Maps
AHS0075 SSR 6.147 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS0075 SSR 2.944 (cM) Automated name-based, Automated name-based View Maps
AHGS2322_t1 SSR 8.472 No other positions
AHGS2393_t1 SSR 10.931 No other positions
AHGS2442 SSR 16.676 No other positions
AHGS2539_t1 SSR 18.054 No other positions
AHGS2520_t1 SSR 19.33 No other positions
AHGS2243_t1 SSR 22.52 No other positions
AHS0335 SSR 23.677 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS0335 SSR 20.754 (cM) Automated name-based, Automated name-based View Maps
AHS2375 SSR 24.864 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS2375 SSR 21.922 (cM) Automated name-based, Automated name-based View Maps
TC7G10 SSR 26.331 peanut - AA_A.duranensis_x_A.stenosperma_b - AA04 TC7G10 SSR 18.331 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A04 TC7G10 SSR 11.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A04 TC7G10 SSR 12.58 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A04 TC7G10 SSR 149.4 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B04 TC7G10 SSR 17.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG9 Ah2TC7G10 SSR 69 (cM) Automated name-based, Automated name-based View Maps
AHGS2638_t1 SSR 27.711 No other positions
AHGS2487 SSR 28.153 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHGS2487 SSR 24.383 (cM) Automated name-based, Automated name-based View Maps
AHS0527 SSR 28.947 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS0527 SSR 25.508 (cM) Automated name-based, Automated name-based View Maps
AHS1348 SSR 29.248 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS1348 SSR 25.986 (cM) Automated name-based, Automated name-based View Maps
AHS2312_t1 SSR 31.842 No other positions
AHS1741_t1 SSR 32.117 No other positions
AHS2927 SSR 32.597 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS2927 SSR 28.869 (cM) Automated name-based, Automated name-based View Maps
AHS0025 SSR 34.865 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS0025 SSR 30.458 (cM) Automated name-based, Automated name-based View Maps
AHGS1761 SSR 34.91 No other positions
AHS1870 SSR 35.678 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A04 AHS1870 SSR 31.255 (cM) Automated name-based, Automated name-based View Maps