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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
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Maps TA05
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TA05
Map Start: 0 cM
Map Stop: 46.7 cM
Features by Type:
73 SSR
8 transposon
81 Total

Map Features

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Items 1 to 25 of 81.       of 4 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA05
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AHS0649 SSR 0 peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 AHS0649 SSR 21.969 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS0649 SSR 26.263 (cM) Automated name-based, Automated name-based View Maps
AHGS3215 SSR 6.072 peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 AHGS3215 SSR 16.517 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHGS3215 SSR 29.008 (cM) Automated name-based, Automated name-based View Maps
AhTE0630 transposon 6.499 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AhTE0630 transposon 31.251 (cM) Automated name-based, Automated name-based View Maps
AHS1735 SSR 7.156 peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 AHS1735 SSR 20.815 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS1735 SSR 29.892 (cM) Automated name-based, Automated name-based View Maps
AHS2590 SSR 10.708 peanut - BB_A.ipaensis_x_A.magna_a - BB09 AHS2590 SSR 15.351 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B09 AHS2590 SSR 44.2 (cM) Automated name-based, Automated name-based View Maps
AHGS1477 SSR 11.457 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHGS1477 SSR 28.595 (cM) Automated name-based, Automated name-based View Maps
AHGS2602_t1 SSR 12.95 No other positions
AHS0515 SSR 14.189 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS0515 SSR 39.598 (cM) Automated name-based, Automated name-based View Maps
AhTE0470 transposon 15.334 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AhTE0470 transposon 36.758 (cM) Automated name-based, Automated name-based View Maps
AHGS2513 SSR 16.343 peanut - BB_A.ipaensis_x_A.magna_b - B05 AHGS2513 SSR 45.8 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB05 AHGS2513 SSR 12.653 (cM) Automated name-based, Automated name-based View Maps
AhTE0949 transposon 16.927 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AhTE0949 transposon 37.81 (cM) Automated name-based, Automated name-based View Maps
AHS3035 SSR 17.211 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS3035 SSR 42.07 (cM) Automated name-based, Automated name-based View Maps
AHGS2709_t2 SSR 17.26 No other positions
AHS0160 SSR 18.56 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS0160 SSR 43.002 (cM) Automated name-based, Automated name-based View Maps
AHGS2008 SSR 20.24 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHGS2008 SSR 43.418 (cM) Automated name-based, Automated name-based View Maps
AHS2734 SSR 21.122 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS2734 SSR 47.271 (cM) Automated name-based, Automated name-based View Maps
AHGS2644 SSR 21.748 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHGS2644 SSR 47.81 (cM) Automated name-based, Automated name-based View Maps
AHS3174 SSR 21.923 No other positions
AHS3098 SSR 22.369 peanut - AA_A.duranensis_x_A.stenosperma_b - AA04 AHS3098 SSR 40.777 (cM) Automated name-based, Automated name-based View Maps
AHS2636 SSR 22.665 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHS2636 SSR 48.779 (cM) Automated name-based, Automated name-based View Maps
AHGS2167_t2 SSR 22.862 No other positions
Seq11E11 SSR 23.111 peanut - AA_A.duranensis_x_A.stenosperma_d - A05 Seq11E11 SSR 95.7 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA05 Seq11E11 SSR 50.53 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 Seq11E11 SSR 51.098 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 seq11E11 SSR 144.95 (cM) Automated name-based, Automated name-based View Maps
AHGS3755 SSR 23.228 peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHGS3755 SSR 25.22 (cM) Automated name-based, Automated name-based View Maps
Seq2F10 SSR 23.309 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 Seq2F10 SSR 50.573 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG05 pPGSSeq2F10 SSR 10.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhV pPGSSeq2F10 SSR 186.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A05 seq2F10 SSR 170.37 (cM) Automated name-based, Automated name-based View Maps
AHGS2076 SSR 23.412 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A05 AHGS2076 SSR 50.259 (cM) Automated name-based, Automated name-based View Maps