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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps TA06
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TA06
Map Start: 0 cM
Map Stop: 108.39 cM
Features by Type:
101 SSR
8 transposon
109 Total

Map Features

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Items 1 to 25 of 109.       of 5 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA06
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC19A02_t1 SSR 0 No other positions
AHGS1727_t1 SSR 8.432 No other positions
AHGS1375_t1 SSR 14.201 No other positions
AHS1359 SSR 16.039 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHS1359 SSR 16.06 (cM) Automated name-based, Automated name-based View Maps
AHGS1948 SSR 16.877 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS1948 SSR 16.09 (cM) Automated name-based, Automated name-based View Maps
AHGS1749 SSR 18.003 No other positions
TC42A02 SSR 18.386 peanut - BB_A.ipaensis_x_A.magna_a - BB06 TC42A02 SSR 15.401 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah3TC42A02 SSR 56.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC42A02 SSR 15.1 (cM) Automated name-based, Automated name-based View Maps
AHGS2139_t2 SSR 24.195 No other positions
AHGS2142 SSR 25.402 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS2142 SSR 13.014 (cM) Automated name-based, Automated name-based View Maps
TC3H07_t1 SSR 29.931 No other positions
TC28C01 SSR 30.965 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 TC28C01 SSR 30.814 (cM) Automated name-based, Automated name-based View Maps
AHGS1882_t1 SSR 33.155 No other positions
TC35F05 SSR 33.337 peanut - AA_A.duranensis_x_A.stenosperma_d - A06 TC35F05 SSR 57.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 TC35F05 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 TC35F05 SSR 31.24 (cM) Automated name-based, Automated name-based View Maps
AC2H11 SSR 33.348 peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 AC2H11 SSR 6.429 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG10 Ah2AC2H11 SSR 46.3 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 AC2H11 SSR 12.566 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A06 AC2H11 SSR 52.8 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A06 AC2H11 SSR 140.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 AC2H11 SSR 43.09 (cM) Automated name-based, Automated name-based View Maps
AHS2837 SSR 33.927 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHS2837 SSR 33.621 (cM) Automated name-based, Automated name-based View Maps
AHGS2920 SSR 34.831 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHGS2920 SSR 35.909 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 AHGS2920 SSR 8.393 (cM) Automated name-based, Automated name-based View Maps
AHGS3209 SSR 35.251 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHGS3209 SSR 34.77 (cM) Automated name-based, Automated name-based View Maps
AHS0149 SSR 35.256 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHS0149 SSR 34.812 (cM) Automated name-based, Automated name-based View Maps
AHGS2149_t1 SSR 35.314 No other positions
AHGS1756_t1 SSR 35.493 No other positions
AHS0014 SSR 35.503 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHS0014 SSR 12.754 (cM) Automated name-based, Automated name-based View Maps
AHGS2616_t1 SSR 35.589 No other positions
AHGS2414 SSR 35.595 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHGS2414 SSR 35.284 (cM) Automated name-based, Automated name-based View Maps
AHS2413 SSR 38.625 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHS2413 SSR 39.478 (cM) Automated name-based, Automated name-based View Maps
AHS0908 SSR 40.752 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A06 AHS0908 SSR 40.631 (cM) Automated name-based, Automated name-based View Maps