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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
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Maps TA08
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TA08
Map Start: 0 cM
Map Stop: 110.438 cM
Features by Type:
89 SSR
9 transposon
98 Total

Map Features

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Items 1 to 25 of 98.       of 4 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC4G06 SSR 0 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 TC4G06 SSR 4.444 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC4G06 SSR 26.6 (cM) Automated name-based, Automated name-based View Maps
AHGS2490_t2 SSR 0.765 No other positions
AHGS1094 SSR 2.022 peanut - BB_A.ipaensis_x_A.magna_a - BB03 AHGS1094 SSR 20.583 (cM) Automated name-based, Automated name-based View Maps
AHGS2660 SSR 2.282 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHGS2660 SSR 6.436 (cM) Automated name-based, Automated name-based View Maps
AHGS1574 SSR 2.839 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHGS1574 SSR 6.734 (cM) Automated name-based, Automated name-based View Maps
AHGS2607 SSR 5.316 peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHGS2607 SSR 35.359 (cM) Automated name-based, Automated name-based View Maps
AHGS1716 SSR 6.396 peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHGS1716 SSR 34.468 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B07 AHGS1716 SSR 53.3 (cM) Automated name-based, Automated name-based View Maps
AHS1587 SSR 6.541 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHS1587 SSR 11.412 (cM) Automated name-based, Automated name-based View Maps
AhTE0227 transposon 7.408 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AhTE0227 transposon 10.914 (cM) Automated name-based, Automated name-based View Maps
AHS1774 SSR 7.455 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHS1774 SSR 12.272 (cM) Automated name-based, Automated name-based View Maps
AHGS1196 SSR 8.296 peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 AHGS1196 SSR 5.574 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHGS1196 SSR 35.617 (cM) Automated name-based, Automated name-based View Maps
AHGS1947_t2 SSR 9.072 No other positions
AHGS1525 SSR 9.431 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHGS1525 SSR 17.772 (cM) Automated name-based, Automated name-based View Maps
TC9B08 SSR 10.339 peanut - TT_ICGS44_x_ICGS76_a - LG08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 TC9B08 SSR 13.818 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC9B08 SSR 25.42 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A01 TC9B08 SSR 152.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhXIX TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIX TC9B08 SSR 8.61 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG03 Ah2TC9B08 SSR 56.3 (cM) Automated name-based, Automated name-based View Maps
AHGS1270 SSR 11.977 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHGS1270 SSR 0 (cM) Automated name-based, Automated name-based View Maps
RM7E04 SSR 14.028 peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 RM7E04.A08 SSR 10.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B07 RM7E04.B07 SSR 87.56 (cM) Automated name-based, Automated name-based View Maps
TC3B05_t1 SSR 16.574 No other positions
AHGS1796_t1 SSR 18.253 No other positions
AHGS1752 SSR 18.5 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHGS1752 SSR 27.487 (cM) Automated name-based, Automated name-based View Maps
AHGS1880 SSR 23.85 peanut - BB_A.ipaensis_x_A.magna_a - BB07 AHGS1880 SSR 41.754 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B07 AHGS1880 SSR 62.8 (cM) Automated name-based, Automated name-based View Maps
AHS2118 SSR 27.259 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 AHS2118 SSR 38.362 (cM) Automated name-based, Automated name-based View Maps
AHGS1718_t1 SSR 28.481 No other positions
AHGS1718_t2 SSR 30.006 No other positions
TC7A02_t1 SSR 32.595 No other positions
AHGS2474_t1 SSR 32.997 No other positions