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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
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Maps TB06
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TB06
Map Start: 0 cM
Map Stop: 47.474 cM
Features by Type:
43 SSR
4 transposon
47 Total

Map Features

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Items 1 to 25 of 47.       of 2 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB06
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC19A02_t2 SSR 0 No other positions
AHGS2595 SSR 5.327 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS2595 SSR 14.135 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA06 AHGS2595 SSR 38.032 (cM) Automated name-based, Automated name-based View Maps
AHGS1977 SSR 8.063 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1977 SSR 81.571 (cM) Automated name-based, Automated name-based View Maps
AHGS1464 SSR 8.997 peanut - BB_A.ipaensis_x_A.magna_b - B06 AHGS1464 SSR 46.9 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS1464 SSR 14.619 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1464 SSR 84.77 (cM) Automated name-based, Automated name-based View Maps
AHGS2396 SSR 11.05 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2396 SSR 84.568 (cM) Automated name-based, Automated name-based View Maps
AHGS2101 SSR 11.41 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2101 SSR 83.257 (cM) Automated name-based, Automated name-based View Maps
AHGS2711 SSR 11.41 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS2711 SSR 14.789 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2711 SSR 87.298 (cM) Automated name-based, Automated name-based View Maps
AHGS1422 SSR 11.809 peanut - BB_A.ipaensis_x_A.magna_a - BB06 AHGS1422 SSR 15.487 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1422 SSR 83.797 (cM) Automated name-based, Automated name-based View Maps
AHGS2139_t3 SSR 12.609 No other positions
AHGS2093 SSR 13.224 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2093 SSR 85.513 (cM) Automated name-based, Automated name-based View Maps
AHGS1359_t2 SSR 14.363 No other positions
AHS1510_t2 SSR 14.583 No other positions
AHGS1756_t2 SSR 15.162 No other positions
AHGS2149_t2 SSR 15.305 No other positions
AHGS1347 SSR 15.882 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1347 SSR 75.824 (cM) Automated name-based, Automated name-based View Maps
AHGS2317 SSR 15.917 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2317 SSR 77.265 (cM) Automated name-based, Automated name-based View Maps
AHGS1361_t2 SSR 15.935 No other positions
AHGS2380 SSR 15.953 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2380 SSR 80.283 (cM) Automated name-based, Automated name-based View Maps
AHGS1742 SSR 15.978 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1742 SSR 86.518 (cM) Automated name-based, Automated name-based View Maps
AHGS1658_t1 SSR 16.069 No other positions
AHGS1337_t2 SSR 16.23 No other positions
AHGS1398 SSR 16.23 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS1398 SSR 76.152 (cM) Automated name-based, Automated name-based View Maps
AHGS1930_t3 SSR 16.23 No other positions
AHGS2172 SSR 16.23 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2172 SSR 79.59 (cM) Automated name-based, Automated name-based View Maps
AHGS2410 SSR 16.274 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 AHGS2410 SSR 66.826 (cM) Automated name-based, Automated name-based View Maps