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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
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Maps TB08
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TB08
Map Start: 0 cM
Map Stop: 33.056 cM
Features by Type:
43 SSR
7 transposon
50 Total

Map Features

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Items 1 to 25 of 50.       of 2 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC20B05_t2 SSR 0 No other positions
AhTE0724 transposon 9.968 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0724 transposon 39.592 (cM) Automated name-based, Automated name-based View Maps
AhTE0705 transposon 11.54 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0705 transposon 47.141 (cM) Automated name-based, Automated name-based View Maps
AHGS1286 SSR 12.177 peanut - BB_A.ipaensis_x_A.magna_a - BB01 AHGS1286 SSR 11.326 (cM) Automated name-based, Automated name-based View Maps
AHGS1186_t2 SSR 13.068 No other positions
AhTE0032 transposon 13.086 peanut - BB_A.ipaensis_x_A.magna_b - B08 AhTE0032 transposon 74.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0032 transposon 50.079 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB08 AhTE0032 transposon 13.401 (cM) Automated name-based, Automated name-based View Maps
AHGS1920 SSR 13.105 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS1920 SSR 49.083 (cM) Automated name-based, Automated name-based View Maps
TC21D06_t2 SSR 13.788 No other positions
AHS2595 SSR 14.891 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHS2595 SSR 79.994 (cM) Automated name-based, Automated name-based View Maps
AhTE0974 transposon 15.97 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0974 transposon 42.877 (cM) Automated name-based, Automated name-based View Maps
AHGS1470_t2 SSR 16.894 No other positions
TC6H03_t2 SSR 17.22 No other positions
AHGS2130 SSR 18.192 peanut - AA_A.duranensis_x_A.stenosperma_b - AA03 AHGS2130 SSR 23.504 (cM) Automated name-based, Automated name-based View Maps
AHGS1658_t2 SSR 18.413 No other positions
AhTE0753 transposon 19.267 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0753 transposon 55.345 (cM) Automated name-based, Automated name-based View Maps
AhTE0218 transposon 19.705 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0218 transposon 55.88 (cM) Automated name-based, Automated name-based View Maps
AHGS2652 SSR 20.517 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2652 SSR 56.957 (cM) Automated name-based, Automated name-based View Maps
AhTE0549 transposon 20.726 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AhTE0549 transposon 57.756 (cM) Automated name-based, Automated name-based View Maps
TC22C01_t2 SSR 21.307 No other positions
AHGS1700 SSR 23.175 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS1700 SSR 72.179 (cM) Automated name-based, Automated name-based View Maps
AHGS1141 SSR 23.657 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS1141 SSR 69.64 (cM) Automated name-based, Automated name-based View Maps
PM443 SSR 23.906 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 PM443 SSR 69.395 (cM) Automated name-based, Automated name-based View Maps
AHGS2587 SSR 24.593 peanut - BB_A.ipaensis_x_A.magna_a - BB08 AHGS2587 SSR 21.769 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2587 SSR 66.713 (cM) Automated name-based, Automated name-based View Maps
AHGS1945 SSR 24.919 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS1945 SSR 75.254 (cM) Automated name-based, Automated name-based View Maps
AHGS2225 SSR 25.182 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B08 AHGS2225 SSR 68.741 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB08 AHGS2225 SSR 23.537 (cM) Automated name-based, Automated name-based View Maps