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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set peanut-TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a
(Reference Set)
Min.
Correspondences
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Maps TB10
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
transposon
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:
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Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Number of
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Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a [ View Map Set Info ]
Map Name: TB10
Map Start: 0 cM
Map Stop: 35.328 cM
Features by Type:
35 SSR
12 transposon
47 Total

Map Features

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Items 1 to 25 of 47.       of 2 | Next
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Seq3A06 SSR 0 peanut - BB_A.ipaensis_x_A.magna_a - BB10 Seq3A06 SSR 31.828 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B08 seq3A06 SSR 121.77 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_ICGV86031_a - LG_AhVIII pPGPSeq3A06 SSR 23.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhVIII pPGPSeq3A06 SSR 23.1 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 Seq3A06 SSR 85.8 (cM) Automated name-based, Automated name-based View Maps
TC31C09 SSR 3.281 peanut - AA_A.duranensis_x_A.stenosperma_d - A10 TC31C09 SSR 39.5 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA10 TC31C09 SSR 27.924 (cM) Automated name-based, Automated name-based View Maps
AC2B03_t2 SSR 12.886 No other positions
TC23H10 SSR 14.001 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 TC23H10 SSR 50.769 (cM) Automated name-based, Automated name-based View Maps
AhTE0709 transposon 16.968 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AhTE0709 transposon 66.251 (cM) Automated name-based, Automated name-based View Maps
AHGS1175_t2 SSR 17.448 No other positions
AHGS1304 SSR 18.062 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1304 SSR 64.63 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1304 SSR 20.728 (cM) Automated name-based, Automated name-based View Maps
AHGS1685 SSR 18.485 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1685 SSR 68.214 (cM) Automated name-based, Automated name-based View Maps
AHGS2763 SSR 18.692 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2763 SSR 55.178 (cM) Automated name-based, Automated name-based View Maps
AHGS2048_t3 SSR 19.109 No other positions
AHGS2443_t3 SSR 19.114 No other positions
AHS0535_t2 SSR 19.538 No other positions
AHGS2227 SSR 19.897 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2227 SSR 60.331 (cM) Automated name-based, Automated name-based View Maps
AhTE0893 transposon 20.021 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AhTE0893 transposon 59.905 (cM) Automated name-based, Automated name-based View Maps
AhTE0761 transposon 20.208 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AhTE0761 transposon 57.614 (cM) Automated name-based, Automated name-based View Maps
AhTE0805 transposon 20.208 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AhTE0805 transposon 60.854 (cM) Automated name-based, Automated name-based View Maps
AHGS1595 SSR 20.215 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1595 SSR 67.59 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1595 SSR 21.6 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1595 SSR 52 (cM) Automated name-based, Automated name-based View Maps
AHGS1626 SSR 20.215 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1626 SSR 61.413 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1626 SSR 21.159 (cM) Automated name-based, Automated name-based View Maps
AHGS1696 SSR 20.215 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1696 SSR 20.992 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1696 SSR 62.73 (cM) Automated name-based, Automated name-based View Maps
AHGS2365 SSR 20.215 peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS2365 SSR 59.589 (cM) Automated name-based, Automated name-based View Maps
AHGS2509_t3 SSR 20.215 No other positions
AhTE0162_t2 transposon 20.422 No other positions
AhTE0163_t2 transposon 20.422 No other positions
AHGS1395 SSR 20.423 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1395 SSR 20.249 (cM) Automated name-based, Automated name-based View Maps
peanut - BB_A.ipaensis_x_A.magna_b - B10 AHGS1395 SSR 56.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1395 SSR 61.836 (cM) Automated name-based, Automated name-based View Maps
AHGS1564 SSR 20.666 peanut - BB_A.ipaensis_x_A.magna_a - BB10 AHGS1564 SSR 20.642 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B10 AHGS1564 SSR 59.238 (cM) Automated name-based, Automated name-based View Maps