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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_TAG24_x_GPBD4_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps AhXIX
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_TAG24_x_GPBD4_a [ View Map Set Info ]
Map Name: AhXIX
Map Start: 0 cM
Map Stop: 83.8 cM
Features by Type:
4 SSR
4 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 4 of 4.
peanut - TT_TAG24_x_GPBD4_a - AhXIX
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC9B08 SSR 0 peanut - AA_A.duranensis_x_A.stenosperma_a - A01 TC9B08 SSR 152.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TA08 TC9B08 SSR 10.339 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - A08 TC9B08 SSR 13.818 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC9B08 SSR 25.42 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG08 TC9B08 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIX TC9B08 SSR 8.61 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_b - LG03 Ah2TC9B08 SSR 56.3 (cM) Automated name-based, Automated name-based View Maps
TC3B05 SSR 7.2 peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhXIII TC3B05 SSR 119.86 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A08 TC3B05 SSR 194.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIX TC3B05 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B07 TC3B05.B07 SSR 85.36 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG13 TC3B05 SSR 51.6 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 TC3B05.A09 SSR 133.27 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_d - A08 TC3B05 SSR 64 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 TC3B05.A08 SSR 10.9 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_b - AA08 TC3B05 SSR 9.898 (cM) Automated name-based, Automated name-based View Maps
GM1357 SSR 41.1 peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 GM1357 SSR 60.89 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhXIX GM1357 SSR 55.564 (cM) Automated name-based, Automated name-based View Maps
GM2754 SSR 83.8 peanut - TT_AhComposite_SujayGowda2012_a - AhXIX GM2754 SSR 116.164 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A08 GM2754 SSR 109.2 (cM) Automated name-based, Automated name-based View Maps