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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_TAG24_x_ICGV86031_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG_AhX
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_TAG24_x_ICGV86031_a [ View Map Set Info ]
Map Name: LG_AhX
Map Start: 0 cM
Map Stop: 49.6 cM
Features by Type:
6 SSR
6 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
peanut - TT_TAG24_x_ICGV86031_a - LG_AhX
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2444 SSR 0 peanut - TT_TG26_x_GPBD4_a - AhX GM2444 SSR 6.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - A06 GM2444.A06 SSR 254.28 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 GM2444.B06 SSR 78.31 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG10 GM2444 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_Tifrunner_x_GT-C20_b - LG3 GM2444 SSR 50.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX GM2444 SSR 0 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX GM2444 SSR 39.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX GM2444 SSR 11.949 (cM) Automated name-based, Automated name-based View Maps
GM1991 SSR 21.8 peanut - TT_TAG24_x_GPBD4_a - AhX GM1991 SSR 62 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX GM1991 SSR 14.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 GM1991 SSR 92.887 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX GM1991 SSR 21.821 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 GM1991 SSR 63.3 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX GM1991 SSR 40.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG10 GM1991 SSR 6.6 (cM) Automated name-based, Automated name-based View Maps
IPAHM165 SSR 29.9 peanut - TT_VG9514_x_TAG24_a - B06 IPAHM165 SSR 41.2 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX IPAHM165 SSR 47.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 IPAHM165 SSR 78.192 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 IPAHM165 SSR 51.41 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX IPAHM165 SSR 25.48 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX IPAHM165 SSR 24.76 (cM) Automated name-based, Automated name-based View Maps
pPGSSeq19A05 SSR 30.8 peanut - TT_RunnerIAC886_x_A.ipaensis-A.duranensis_a - TB06 Seq19A05 SSR 17.431 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX pPGSSeq19A05 SSR 26.38 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX pPGSseq19A05 SSR 72.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX pPGSseq19A05 SSR 27.331 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 seq19A05 SSR 51.41 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX pPGSseq19A05 SSR 49.1 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 Seq19A05 SSR 82.099 (cM) Automated name-based, Automated name-based View Maps
IPAHM524 SSR 41 peanut - TT_AhConsensus_GautamiFonceka2012_a - B02 IPAHM524.B02 SSR 127.35 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX IPAHM524 SSR 77.8 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS44_x_ICGS76_a - LG10 IPAHM524 SSR 7.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhComposite_SujayGowda2012_a - AhX IPAHM524 SSR 35.675 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_ICGS76_x_CSMG84-1_a - LG10 IPAHM524 SSR 54.9 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TG26_x_GPBD4_a - AhX IPAHM524 SSR 68.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX IPAHM524 SSR 46.33 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 IPAHM524.B06 SSR 41.49 (cM) Automated name-based, Automated name-based View Maps
TC4D09 SSR 49.6 peanut - TT_AhComposite_SujayGowda2012_a - AhX TC4D09 SSR 44.137 (cM) Automated name-based, Automated name-based View Maps
peanut - AA_A.duranensis_x_A.stenosperma_a - A10 TC4D09 SSR 58.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiFonceka2012_a - B06 TC4D09 SSR 3.95 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_TAG24_x_GPBD4_a - AhX TC4D09 SSR 109.4 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_GautamiPandey2012_a - LG_AhX TC4D09 SSR 54.93 (cM) Automated name-based, Automated name-based View Maps
peanut - TT_AhConsensus_ShirasawaBertioli2013_a - B06 TC4D09 SSR 61.98 (cM) Automated name-based, Automated name-based View Maps