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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Tifrunner_x_GT-C20_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LGT14
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
QTL_fungal
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Tifrunner_x_GT-C20_a [ View Map Set Info ]
Map Name: LGT14
Map Start: 0 cM
Map Stop: 53.9 cM
Features by Type:
1 QTL_fungal
9 SSR
10 Total

Map Features

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Items 1 to 10 of 10.
peanut - TT_Tifrunner_x_GT-C20_a - LGT14
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Seq15C12-285 SSR 0 No other positions
IPAHM105-420 SSR 13.8 No other positions
IPAHM108-900 SSR 21.4 No other positions
GM2033-150 SSR 31.5 No other positions
GM1959-185 SSR 36.5 No other positions
IPAHM219-200 SSR 38 No other positions
Seq14D11-180 SSR 39.6 No other positions
Late and Early leaf spot 1-46 QTL_fungal 39.6 - 42.8 No other positions
IPAHM451-300 SSR 42.8 No other positions
Seq13A10-280 SSR 53.9 No other positions