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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set peanut-TT_Tifrunner_x_GT-C20_a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LGT9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
CAPS
QTL_viral
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
automatic
blastn
e-PCR
tblastx
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: genetic [ View Map Type Info ]
Map Set Name: peanut - TT_Tifrunner_x_GT-C20_a [ View Map Set Info ]
Map Name: LGT9
Map Start: 0 cM
Map Stop: 55.2 cM
Features by Type:
1 CAPS
1 QTL_viral
18 SSR
20 Total

Map Features

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Items 1 to 20 of 20.
peanut - TT_Tifrunner_x_GT-C20_a - LGT9
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RN35H04-1500 SSR 0 No other positions
TSWV 2-20 QTL_viral 0 - 18.4 No other positions
ahFAD2A CAPS 4.7 peanut - TT_AhConsensus_GautamiFonceka2012_a - A09 ahFAD2A CAPS 22.92 (cM) Automated name-based, Automated name-based View Maps
AC3C07-70 SSR 18.4 No other positions
TC5D06-210 SSR 22.6 No other positions
GM2450-800 SSR 26 No other positions
GM849-2300 SSR 29 No other positions
ARS768-260 SSR 32.7 No other positions
ARS786-210 SSR 34.9 No other positions
GM2359-300 SSR 36.1 No other positions
ARS766-200 SSR 38.1 No other positions
ARS752-300 SSR 39.3 No other positions
ARS759-1200 SSR 40.6 No other positions
ARS757-350 SSR 42 No other positions
GM2792-300 SSR 42.9 No other positions
ARS751-265 SSR 44.8 No other positions
TC1D02-280 SSR 46.3 No other positions
ARS742-100 SSR 47.8 No other positions
GM1047-340 SSR 50.2 No other positions
GM2584-1000 SSR 55.2 No other positions